RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 HASPINQ8TF76 798 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 HMGB4Q8WW32 186 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 SEPT8Q92599 483 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 MYLPFQ96A32 169 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZBTB9Q96C00 473 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 HAUS1Q96CS2 278 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 RTP4Q96DX8 246 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 RNF31Q96EP0 1072 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 PGM2Q96G03 612 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 DCLRE1CQ96SD1 692 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 KCNK16Q96T55 309 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TMEM109Q9BVC6 243 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TRIM62Q9BVG3 475 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 ULBP1Q9BZM6 244 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 CDC42EP4Q9H3Q1 356 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 NRDE2Q9H7Z3 1164 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TMBIM4Q9HC24 238 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 MTMR10Q9NXD2 777 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 DNAJC16Q9Y2G8 782 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 MKI67P46013 3256 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 SF3B1O75533 1304 aaKnown RBP eCLIP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 NYNRINQ9P2P1 1898 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 BCLAF3A2AJT9 711 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 YJEFN3A6XGL0 299 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 E7ENQ6 273 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 F8W810 466 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 M0QYT0 321 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SYN3O14994 580 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PPM1DO15297 605 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TRIAP1O43715 76 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SHOX2O60902 331 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SCAF4O95104 1147 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 F9P00740 461 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 IFNB1P01574 187 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CXCL10P02778 98 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 FYNP06241 537 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CCL5P13501 91 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 GATA3P23771 443 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CYP2F1P24903 491 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SULT1E1P49888 294 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ROR1Q01973 937 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 MTAPQ13126 283 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 XRCC4Q13426 336 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZNF124Q15973 351 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CA9Q16790 459 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 KRT71Q3SY84 523 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PPP6R3Q5H9R7 873 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TMEM196Q5HYL7 178 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 RNASEH2BQ5TBB1 312 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 AGBL2Q5U5Z8 902 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SYPL2Q5VXT5 272 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CFAP161Q6P656 301 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 C4orf22Q6V702 233 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 BHLHA9Q7RTU4 235 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CCDC25Q86WR0 208 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 UNC45BQ8IWX7 931 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 IZUMO1Q8IYV9 350 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CCDC185Q8N715 623 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DBF4BQ8NFT6 615 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ST8SIA4Q92187 359 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 NTAN1Q96AB6 310 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZUFSPQ96AP4 578 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 FAM136AQ96C01 138 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DEFB118Q96PH6 123 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CSPG4P5Q96PW8 444 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 VN1R3Q9BXE9 311 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ROPN1BQ9BZX4 212 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 AMBRA1Q9C0C7 1298 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZCWPW1Q9H0M4 648 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DHX35Q9H5Z1 703 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ROPN1Q9HAT0 212 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TMLHEQ9NVH6 421 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 GPATCH2LQ9NWQ4 482 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CWC15Q9P013 229 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DNAJB4Q9UDY4 337 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 FZD10Q9ULW2 581 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ARHGAP26Q9UNA1 814 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PCDHB7Q9Y5E2 793 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 MTCL1Q9Y4B5 1905 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 COL4A6Q14031 1691 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PLXNA4Q9HCM2 1894 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 MARCH11A6NNE9 402 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SLC38A8A6NNN8 435 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CAPN9O14815 690 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SHBGP04278 402 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZSCAN5DPP0CG00 497 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ETS1P14921 441 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 NR1D1P20393 614 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 RPL22P35268 128 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ADRA1BP35368 520 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ACTN2P35609 894 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 OR1G1P47890 313 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CTCFP49711 727 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TIRAPP58753 221 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PITX1P78337 314 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DEUP1Q05D60 604 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CLCA4Q14CN2 919 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ACOX1Q15067 660 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms