RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 SAT1P21673 171 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 HOXC13P31276 330 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 ACSL1P33121 698 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 ACTN2P35609 894 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 PNLIPRP2P54317 469 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 WASHC5Q12768 1159 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 KIR2DS5Q14953 304 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 HECTD3Q5T447 861 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 NDUFAF5Q5TEU4 345 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 C19orf48Q6RUI8 117 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 PACS1Q6VY07 963 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 INTS8Q75QN2 995 aaKnown RBP4.79□□□□□ -1.64
SCFD1-211ENST00000554437 DCUN1D3Q8IWE4 304 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 TBC1D16Q8TBP0 767 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 SMPDL3BQ92485 455 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 SEMA4DQ92854 862 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 ALG14Q96F25 216 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 PAFAH2Q99487 392 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 TEX12Q9BXU0 123 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 OSGEPL1Q9H4B0 414 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 SDF2L1Q9HCN8 221 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 ZNF334Q9HCZ1 680 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-211ENST00000554437 ARGLU1Q9NWB6 273 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-211ENST00000554437 FAM118AQ9NWS6 357 aa4.79□□□□□ -1.64
SCFD1-211ENST00000554437 PTRH2Q9Y3E5 179 aaKnown RBP4.79□□□□□ -1.64
SCFD1-211ENST00000554437 A0A0B4J293 547 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 SLC22A3O75751 556 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 BAG4O95429 457 aaKnown RBP4.78□□□□□ -1.64
SCFD1-211ENST00000554437 APOA4P06727 396 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 FAM200BP0CF97 657 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 SNRPEP62304 92 aaKnown RBP4.78□□□□□ -1.64
SCFD1-211ENST00000554437 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 DUOXA1Q1HG43 343 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 FAM98BQ52LJ0 330 aaKnown RBP4.78□□□□□ -1.64
SCFD1-211ENST00000554437 SLC10A5Q5PT55 438 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 ALS2CLQ60I27 953 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 SLC30A6Q6NXT4 461 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 KBTBD6Q86V97 674 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 PTOV1Q86YD1 416 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 ARL10Q8N8L6 244 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 CCDC191Q8NCU4 936 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 ST6GAL2Q96JF0 529 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 SLX1AQ9BQ83 275 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 SLF1Q9BQI6 1058 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-211ENST00000554437 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
SCFD1-211ENST00000554437 GTPBP10A4D1E9 387 aaKnown RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 A8MV72 311 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 AVILO75366 819 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 EIF2DP41214 584 aaKnown RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 PSMC6P62333 389 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 MBTD1Q05BQ5 628 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 CXCL9Q07325 125 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 STK4Q13043 487 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 IGSF11Q5DX21 431 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 ADALQ6DHV7 355 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 MEX3BQ6ZN04 569 aaKnown RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 USP43Q70EL4 1123 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 VSIG1Q86XK7 387 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 HSCBQ8IWL3 235 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 SCRN2Q96FV2 425 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 SLC22A12Q96S37 553 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 TSPAN18Q96SJ8 248 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 KIFC3Q9BVG8 833 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 MXD3Q9BW11 206 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 MRPL9Q9BYD2 267 aaKnown RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 TFB2MQ9H5Q4 396 aaKnown RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 SLC38A7Q9NVC3 462 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 MIOSQ9NXC5 875 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 PSD3Q9NYI0 1048 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 WSB2Q9NYS7 404 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 LARSQ9P2J5 1176 aaKnown RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 HACL1Q9UJ83 578 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 ZNF148Q9UQR1 794 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 JRKLQ9Y4A0 524 aa4.77□□□□□ -1.65
SCFD1-211ENST00000554437 GREB1LQ9C091 1923 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-211ENST00000554437 A0A087WYN8 130 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 A0A1W2PPI3 338 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 TRIM64A6NGJ6 449 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 TRIM64BA6NI03 449 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 H0YIN7 160 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 H7C0S8 307 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 GPR137BO60478 399 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ENTPD3O75355 529 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 BEST1O76090 585 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ZWINTO95229 277 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 GCNT3O95395 438 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 BAG2O95816 211 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 PRSS1P07477 247 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 NR1D1P20393 614 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 PSMC4P43686 418 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 MMP15P51511 669 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 ARSEP51690 589 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 CALD1Q05682 793 aaKnown RBP4.76□□□□□ -1.65
SCFD1-211ENST00000554437 PLA2G7Q13093 441 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 KIR2DS3Q14952 304 aa4.76□□□□□ -1.65
SCFD1-211ENST00000554437 PCLAFQ15004 111 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms