RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CERS6Q6ZMG9 384 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 RSC1A1Q92681 617 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 SLCO2A1Q92959 643 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 C12orf66Q96MD2 445 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 CATSPERZQ9NTU4 200 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 MARCH4Q9P2E8 410 aaPredicted RBP19.92■□□□□ 0.78
FOXA1-203ENST00000553751 SOX13Q9UN79 622 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 PCDHGA7Q9Y5G6 932 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 SAR1BQ9Y6B6 198 aa19.92■□□□□ 0.78
FOXA1-203ENST00000553751 CFAP47Q6ZTR5 3102 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 CTAGE9A4FU28 777 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 QSOX1O00391 747 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 GSTM1P09488 218 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 MLNP12872 115 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 CCL4P13236 92 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 TYRP1P17643 537 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 ARNTP27540 789 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 GFERP55789 205 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 GSTM4Q03013 218 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 ARHGAP22Q7Z5H3 698 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 C17orf53Q8N3J3 647 aaPredicted RBP19.91■□□□□ 0.78
FOXA1-203ENST00000553751 MPP5Q8N3R9 675 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 ZNF248Q8NDW4 579 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 MCUQ8NE86 351 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 MFSD3Q96ES6 412 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 SERPINB12Q96P63 405 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 OR52A5Q9H2C5 316 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 AKAP7Q9P0M2 348 aaPredicted RBP19.91■□□□□ 0.78
FOXA1-203ENST00000553751 PCYOX1Q9UHG3 505 aa19.91■□□□□ 0.78
FOXA1-203ENST00000553751 RRP8O43159 456 aaKnown RBP19.9■□□□□ 0.78
FOXA1-203ENST00000553751 C9P02748 559 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 SLC5A2P31639 672 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 PTK6Q13882 451 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 PPP1R7Q15435 360 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 AARS2Q5JTZ9 985 aaKnown RBP19.9■□□□□ 0.78
FOXA1-203ENST00000553751 SNAP47Q5SQN1 464 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 ARMC3Q5W041 872 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 CES3Q6UWW8 571 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 LDB1Q86U70 411 aaPredicted RBP19.9■□□□□ 0.78
FOXA1-203ENST00000553751 PLXDC1Q8IUK5 500 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 NAT8LQ8N9F0 302 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 AGBL5Q8NDL9 886 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 JPH3Q8WXH2 748 aaPredicted RBP19.9■□□□□ 0.78
FOXA1-203ENST00000553751 TTC1Q99614 292 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 XAB2Q9HCS7 855 aaKnown RBP19.9■□□□□ 0.78
FOXA1-203ENST00000553751 KLHL3Q9UH77 587 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 AHCTF1Q8WYP5 2266 aa19.9■□□□□ 0.78
FOXA1-203ENST00000553751 GOLGA8MH3BSY2 632 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 CD3EAPO15446 510 aaKnown RBP19.89■□□□□ 0.77
FOXA1-203ENST00000553751 FTH1P02794 183 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 FGF3P11487 239 aaPredicted RBP19.89■□□□□ 0.77
FOXA1-203ENST00000553751 AMD1P17707 334 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 ITPKBP27987 946 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 PDHA2P29803 388 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 CSTF2P33240 577 aaKnown RBP eCLIP19.89■□□□□ 0.77
FOXA1-203ENST00000553751 PTGIRP43119 386 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 MAGEA3P43357 314 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 PREPP48147 710 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 MAPK10P53779 464 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 RPA4Q13156 261 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 RNASEH2BQ5TBB1 312 aaKnown RBP19.89■□□□□ 0.77
FOXA1-203ENST00000553751 C19orf48Q6RUI8 117 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 JAMLQ86YT9 394 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 HNRNPLLQ8WVV9 542 aaKnown RBP19.89■□□□□ 0.77
FOXA1-203ENST00000553751 TRIM56Q9BRZ2 755 aaKnown RBP19.89■□□□□ 0.77
FOXA1-203ENST00000553751 KIR3DX1Q9H7L2 352 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 FOXJ2Q9P0K8 574 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 ACSL6Q9UKU0 697 aa19.89■□□□□ 0.77
FOXA1-203ENST00000553751 A8MU76 341 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 C9orf172C9J069 976 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 LIN7AO14910 233 aaPredicted RBP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 NVLO15381 856 aaKnown RBP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 CAPN5O15484 640 aaPredicted RBP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 PRAMEF10O60809 474 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 VAPBO95292 243 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 ANKRD34CP0C6C1 535 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 OR56A5P0C7T3 313 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 LEPRP48357 1165 aaKnown RBP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 TTPAP49638 278 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 KIAA0930Q6ICG6 404 aaPredicted RBP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 LRRC69Q6ZNQ3 347 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 SPACA3Q8IXA5 215 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 PPIL6Q8IXY8 311 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 AGGF1Q8N302 714 aaeCLIP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 ZFPM2Q8WW38 1151 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 KCNE4Q8WWG9 221 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 ELMO1Q92556 727 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 USP7Q93009 1102 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 PMEPA1Q969W9 287 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 NAF1Q96HR8 494 aaKnown RBP19.88■□□□□ 0.77
FOXA1-203ENST00000553751 C9orf72Q96LT7 481 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 TGM7Q96PF1 710 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 OCIAD1Q9NX40 245 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 ASIC3Q9UHC3 531 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 SLC24A2Q9UI40 661 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 ANAPC5Q9UJX4 755 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 PTPRQQ9UMZ3 2332 aa19.88■□□□□ 0.77
FOXA1-203ENST00000553751 PPARGP37231 505 aaPredicted RBP19.87■□□□□ 0.77
FOXA1-203ENST00000553751 ABCG1P45844 678 aa19.87■□□□□ 0.77
FOXA1-203ENST00000553751 ARCN1P48444 511 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms