RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PNMA2Q9UL42 364 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 B3GALT5Q9Y2C3 310 aa3.03□□□□□ -1.92
VRK1-202ENST00000553683 LOC100509620A0A075B734 347 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 A0A1W2PN81 502 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 HHLA1C9JL84 531 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 PTGES3LE9PB15 166 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 VILLO15195 856 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 CIDEAO60543 219 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 GCNT3O95395 438 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 KRT19P08727 400 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 CLTBP09497 229 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 PAX3P23760 479 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 MAPK4P31152 587 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 CHRNA7P36544 502 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 PNLIPRP2P54317 469 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 CD81P60033 236 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 SNRPEP62304 92 aaKnown RBP3.02□□□□□ -1.93
VRK1-202ENST00000553683 SIRPAP78324 504 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 KCNJ10P78508 379 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 KRT79Q5XKE5 535 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 TMEM198Q66K66 360 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 FAM53AQ6NSI3 398 aaPredicted RBP3.02□□□□□ -1.93
VRK1-202ENST00000553683 FAAP20Q6NZ36 180 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 FBXL22Q6P050 247 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 MFSD6Q6ZSS7 791 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 NOTCH2NLQ7Z3S9 236 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 CERS3Q8IU89 383 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 MOSPD2Q8NHP6 518 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 MTERF3Q96E29 417 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 CEP295NLQ96MC4 621 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 NEK1Q96PY6 1258 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 DDOQ99489 341 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 RTN4RQ9BZR6 473 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 HRH4Q9H3N8 390 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 DNAJC18Q9H819 358 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 SCRT2Q9NQ03 307 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 SLC52A3Q9NQ40 469 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 OLFML3Q9NRN5 406 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 ZDHHC18Q9NUE0 388 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 MIOSQ9NXC5 875 aa3.02□□□□□ -1.93
VRK1-202ENST00000553683 SUCLA2Q9P2R7 463 aaPredicted RBP3.02□□□□□ -1.93
VRK1-202ENST00000553683 DISP3Q9P2K9 1392 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 FLT1P17948 1338 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 LNP1A1A4G5 178 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 A6NL46 340 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 NR5A2O00482 541 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 SLC22A2O15244 555 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 TSPAN9O75954 239 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 RSL1D1O76021 490 aaKnown RBP3.01□□□□□ -1.93
VRK1-202ENST00000553683 EDN1P05305 212 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 CKMT2P17540 419 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 ALDH4A1P30038 563 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 SLC6A6P31641 620 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 GARSP41250 739 aaKnown RBP3.01□□□□□ -1.93
VRK1-202ENST00000553683 THOP1P52888 689 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 MELKQ14680 651 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 TEAD2Q15562 447 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 C15orf59Q2T9L4 293 aaPredicted RBP3.01□□□□□ -1.93
VRK1-202ENST00000553683 DUSP28Q4G0W2 176 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 ALS2CLQ60I27 953 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 DENND5BQ6ZUT9 1274 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 CPSF7Q8N684 471 aaKnown RBP3.01□□□□□ -1.93
VRK1-202ENST00000553683 TBC1D16Q8TBP0 767 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 SEMA4DQ92854 862 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 RTP3Q9BQQ7 232 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 FSD1Q9BTV5 496 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 SPATC1LQ9H0A9 340 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 OSGEPL1Q9H4B0 414 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 SLC7A7Q9UM01 511 aa3.01□□□□□ -1.93
VRK1-202ENST00000553683 GIMAP1-GIMAP5A0A087WTJ2 511 aa3□□□□□ -1.93
VRK1-202ENST00000553683 IGHV4-61A0A0C4DH41 118 aa3□□□□□ -1.93
VRK1-202ENST00000553683 DUXAA6NLW8 204 aa3□□□□□ -1.93
VRK1-202ENST00000553683 AGAP14A8MT82 685 aa3□□□□□ -1.93
VRK1-202ENST00000553683 TCERG1O14776 1098 aaKnown RBP3□□□□□ -1.93
VRK1-202ENST00000553683 TO15178 435 aa3□□□□□ -1.93
VRK1-202ENST00000553683 PAPSS1O43252 624 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 SSX4O60224 188 aa3□□□□□ -1.93
VRK1-202ENST00000553683 RNASEH1O60930 286 aaKnown RBP3□□□□□ -1.93
VRK1-202ENST00000553683 NADKO95544 446 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 IGHV4-59P01825 116 aa3□□□□□ -1.93
VRK1-202ENST00000553683 KRT5P13647 590 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ZNF26P17031 533 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 NMBRP28336 390 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ACSL1P33121 698 aa3□□□□□ -1.93
VRK1-202ENST00000553683 SLC15A1P46059 708 aa3□□□□□ -1.93
VRK1-202ENST00000553683 EIF5P55010 431 aaKnown RBP3□□□□□ -1.93
VRK1-202ENST00000553683 MFAP4P55083 255 aa3□□□□□ -1.93
VRK1-202ENST00000553683 EPS8Q12929 822 aa3□□□□□ -1.93
VRK1-202ENST00000553683 TUBB2AQ13885 445 aa3□□□□□ -1.93
VRK1-202ENST00000553683 IRF3Q14653 427 aa3□□□□□ -1.93
VRK1-202ENST00000553683 GRTP1Q5TC63 336 aa3□□□□□ -1.93
VRK1-202ENST00000553683 DHRS7BQ6IAN0 325 aaPredicted RBP3□□□□□ -1.93
VRK1-202ENST00000553683 C15orf39Q6ZRI6 1047 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ZNF554Q86TJ5 538 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ISCA2Q86U28 154 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ZNF611Q8N823 705 aa3□□□□□ -1.93
VRK1-202ENST00000553683 ZNF248Q8NDW4 579 aa3□□□□□ -1.93
VRK1-202ENST00000553683 NSUN4Q96CB9 384 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms