RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GPR150Q8NGU9 434 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 OR1L3Q8NH93 324 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 ITLN2Q8WWU7 325 aaPredicted RBP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 HSPH1Q92598 858 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 TSGA13Q96PP4 275 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 ZCCHC2Q9C0B9 1178 aaKnown RBP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 ZBTB20Q9HC78 741 aaPredicted RBP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 PTRH2Q9Y3E5 179 aaKnown RBP14.87□□□□□ -0.03
CACNB3-220ENST00000551716 AP1M2Q9Y6Q5 423 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 COLEC10Q9Y6Z7 277 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 ABCA2Q9BZC7 2435 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 SEC16AO15027 2179 aa14.87□□□□□ -0.03
CACNB3-220ENST00000551716 AKAP9Q99996 3911 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 EPHB6O15197 1021 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 ZNF749O43361 778 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 MTX2O75431 263 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 JRKO75564 520 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 POP7O75817 140 aaKnown RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 LCA5LO95447 670 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 KLK7P49862 253 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 KPNA2P52292 529 aaKnown RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 OTUD4Q01804 1114 aaKnown RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 GALNT2Q10471 571 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 ZNF789Q5FWF6 425 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 CT47A1Q5JQC4 288 aaPredicted RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 RPUSD3Q6P087 351 aaKnown RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 MRGPRGQ86SM5 289 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 GPR135Q8IZ08 494 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 NEK11Q8NG66 645 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 OR2Y1Q8NGV0 311 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 GDAP1Q8TB36 358 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 EID2BQ96D98 161 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 GPR63Q9BZJ6 419 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 SAMSN1Q9NSI8 373 aaKnown RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 OLAHQ9NV23 265 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 IMP3Q9NV31 184 aaKnown RBP14.86□□□□□ -0.03
CACNB3-220ENST00000551716 TAB2Q9NYJ8 693 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 SLC24A2Q9UI40 661 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 PSMD13Q9UNM6 376 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 NAV3Q8IVL0 2385 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 PIKFYVEQ9Y2I7 2098 aa14.86□□□□□ -0.03
CACNB3-220ENST00000551716 PKDREJQ9NTG1 2253 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 KLHL33A6NCF5 533 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 SNRPB2P08579 225 aaKnown RBP14.85□□□□□ -0.03
CACNB3-220ENST00000551716 FERP16591 822 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 NIPAL4Q0D2K0 466 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 ASIC2Q16515 512 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 HIF1AQ16665 826 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 METRNLQ641Q3 311 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 ZNF385CQ66K41 422 aaPredicted RBP14.85□□□□□ -0.03
CACNB3-220ENST00000551716 XKRXQ6PP77 449 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 ANKRD20A12PQ8NF67 263 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 AP1M1Q9BXS5 423 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 TRIM8Q9BZR9 551 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 EPS8L2Q9H6S3 715 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 KIR3DX1Q9H7L2 352 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 MRPL47Q9HD33 250 aaKnown RBP14.85□□□□□ -0.03
CACNB3-220ENST00000551716 NDOR1Q9UHB4 597 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 POMT2Q9UKY4 750 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 ACSL5Q9ULC5 683 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 SHOC2Q9UQ13 582 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
CACNB3-220ENST00000551716 SVILO95425 2214 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 AGPSO00116 658 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 GADD45BO75293 160 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-220ENST00000551716 RARAP10276 462 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 HLA-DPA1P20036 260 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 IL1R2P27930 398 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 NDUFS1P28331 727 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 CD86P42081 329 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 DCDP81605 110 aaKnown RBP14.84□□□□□ -0.03
CACNB3-220ENST00000551716 GALNT3Q14435 633 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 KRT33BQ14525 404 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 SMTNL2Q2TAL5 461 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 KHDC1Q4VXA5 237 aaKnown RBP14.84□□□□□ -0.03
CACNB3-220ENST00000551716 ZDHHC20Q5W0Z9 365 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 PROKR1Q8TCW9 393 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 DTX3LQ8TDB6 740 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 PCDH18Q9HCL0 1135 aa14.84□□□□□ -0.03
CACNB3-220ENST00000551716 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.84□□□□□ -0.03
CACNB3-220ENST00000551716 IFT80Q9P2H3 777 aaPredicted RBP14.84□□□□□ -0.03
CACNB3-220ENST00000551716 TMCO5BA8MYB1 307 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 PCDH17O14917 1159 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 PYGMP11217 842 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 CD1EP15812 388 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 POLR2CP19387 275 aaPredicted RBP14.83□□□□□ -0.04
CACNB3-220ENST00000551716 MX2P20592 715 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 KRT81Q14533 505 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 LDLRAP1Q5SW96 308 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 PRAMEF13Q5VWM6 474 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 CCDC70Q6NSX1 233 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 FBXO38Q6PIJ6 1188 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 PPP1R32Q7Z5V6 425 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 OR4E2Q8NGC2 313 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 N4BP2L2Q92802 583 aaPredicted RBP14.83□□□□□ -0.04
CACNB3-220ENST00000551716 ZNF653Q96CK0 615 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 VPS50Q96JG6 964 aa14.83□□□□□ -0.04
CACNB3-220ENST00000551716 CNDP1Q96KN2 507 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms