RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 FOXJ1Q92949 421 aa19.34■□□□□ 0.69
SSH1-209ENST00000551165 FAR2Q96K12 515 aa19.34■□□□□ 0.69
SSH1-209ENST00000551165 TMEM79Q9BSE2 394 aa19.34■□□□□ 0.69
SSH1-209ENST00000551165 RSPH9Q9H1X1 276 aaPredicted RBP19.34■□□□□ 0.69
SSH1-209ENST00000551165 HEBP1Q9NRV9 189 aa19.34■□□□□ 0.69
SSH1-209ENST00000551165 CKAP5Q14008 2032 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 CFAP99D6REC4 459 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 SPECC1L-ADORA2AF8WAN1 911 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 PIP5K1BO14986 540 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 GYG2O15488 501 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 INHBCP55103 352 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 RBBP7Q16576 425 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 ZXDCQ2QGD7 858 aaPredicted RBP19.33■□□□□ 0.69
SSH1-209ENST00000551165 TCHHL1Q5QJ38 904 aaPredicted RBP19.33■□□□□ 0.69
SSH1-209ENST00000551165 AGBL4Q5VU57 503 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 RAET1GQ6H3X3 334 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 RAVER1Q8IY67 606 aaKnown RBP19.33■□□□□ 0.69
SSH1-209ENST00000551165 TWIST2Q8WVJ9 160 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 EGFL8Q99944 293 aa19.33■□□□□ 0.69
SSH1-209ENST00000551165 COPG1Q9Y678 874 aaKnown RBP19.33■□□□□ 0.69
SSH1-209ENST00000551165 GSC2O15499 205 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 PON2Q15165 354 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 LDLRAP1Q5SW96 308 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 SCIMPQ6UWF3 145 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 CEP70Q8NHQ1 597 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 RHBDF1Q96CC6 855 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 C19orf60Q96EN9 201 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 MKRN2Q9H000 416 aaKnown RBP19.33■□□□□ 0.68
SSH1-209ENST00000551165 NOL11Q9H8H0 719 aaKnown RBP19.33■□□□□ 0.68
SSH1-209ENST00000551165 CD207Q9UJ71 328 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 PDE10AQ9Y233 779 aa19.33■□□□□ 0.68
SSH1-209ENST00000551165 A0A1W2PP55 124 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 IGLON5A6NGN9 336 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 OR4F21O95013 312 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 LINC00032P0C843 101 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 CBSLP0DN79 551 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 CBSP35520 551 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 GPR1P46091 355 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 PREPP48147 710 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 ERVPABLB-1P60509 514 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 TBCCQ15814 346 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 TMEM196Q5HYL7 178 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 TMEM220Q6QAJ8 160 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 GOLGA7Q7Z5G4 137 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 CXorf40AQ8TE69 158 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 ASB2Q96Q27 587 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 KLHL42Q9P2K6 505 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 GULP1Q9UBP9 304 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 LIMD1Q9UGP4 676 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 OR7A17O14581 309 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 NUAK1O60285 661 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 HNRNPCL1O60812 293 aaKnown RBP19.32■□□□□ 0.68
SSH1-209ENST00000551165 VCLP18206 1134 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 PIK3R1P27986 724 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 PBLDP30039 288 aaPredicted RBP19.32■□□□□ 0.68
SSH1-209ENST00000551165 TNFRSF4P43489 277 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 COPAP53621 1224 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 PCBP2Q15366 365 aaKnown RBP eCLIP19.32■□□□□ 0.685e-7■■■■■ 56
SSH1-209ENST00000551165 CRY1Q16526 586 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 PREPLQ4J6C6 727 aaPredicted RBP19.32■□□□□ 0.68
SSH1-209ENST00000551165 NUDT18Q6ZVK8 323 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 LARP4Q71RC2 724 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSH1-209ENST00000551165 PACS2Q86VP3 889 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 HDDC3Q8N4P3 179 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 NECTIN4Q96NY8 510 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 OR2AG1Q9H205 316 aa19.32■□□□□ 0.68
SSH1-209ENST00000551165 PCYT1BQ9Y5K3 369 aaPredicted RBP19.32■□□□□ 0.68
SSH1-209ENST00000551165 ADAM23O75077 832 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 GPC4O75487 556 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 ESRRBO95718 433 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 CPOXP36551 454 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 SLC25A3Q00325 362 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 FAM46CQ5VWP2 391 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 LETMD1Q6P1Q0 360 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 UBE2R2Q712K3 238 aaPredicted RBP19.31■□□□□ 0.68
SSH1-209ENST00000551165 AFAP1L2Q8N4X5 818 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 CPSF7Q8N684 471 aaKnown RBP19.31■□□□□ 0.68
SSH1-209ENST00000551165 ACTRT2Q8TDY3 377 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 ASB11Q8WXH4 323 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 RASSF4Q9H2L5 321 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 AKTIPQ9H8T0 292 aa19.31■□□□□ 0.68
SSH1-209ENST00000551165 SYNCRIPO60506 623 aaKnown RBP19.3■□□□□ 0.68
SSH1-209ENST00000551165 CCNT2O60583 730 aaKnown RBP19.3■□□□□ 0.68
SSH1-209ENST00000551165 AP2A2O94973 939 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 S100BP04271 92 aaPredicted RBP19.3■□□□□ 0.68
SSH1-209ENST00000551165 COX4I1P13073 169 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 COL9A1P20849 921 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 RPIAP49247 311 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 GTF2H2Q13888 395 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 GTF2H2CQ6P1K8 395 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 ADGRG6Q86SQ4 1221 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 PHYKPLQ8IUZ5 450 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 DDIASQ8IXT1 998 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 CDYL2Q8N8U2 506 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 IL17RCQ8NAC3 791 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 FAM13CQ8NE31 585 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 OR56A4Q8NGH8 313 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 HMGCLL1Q8TB92 370 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 STON2Q8WXE9 905 aa19.3■□□□□ 0.68
SSH1-209ENST00000551165 KLC4Q9NSK0 619 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms