RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 OR2L2Q8NH16 312 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 ZNF398Q8TD17 642 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 P3H4Q92791 437 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 ZNF501Q96CX3 271 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-221ENST00000550914 LINC00615Q96LM1 132 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-221ENST00000550914 C12orf66Q96MD2 445 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 C19orf43Q9BQ61 176 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 SLC25A23Q9BV35 468 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 TRIM55Q9BYV6 548 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 AKIRIN1Q9H9L7 192 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-221ENST00000550914 SYTL2Q9HCH5 934 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 ABHD10Q9NUJ1 306 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 IMP3Q9NV31 184 aaKnown RBP12.54□□□□□ -0.4
PTCH1-221ENST00000550914 SAE1Q9UBE0 346 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-221ENST00000550914 SLC24A2Q9UI40 661 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 TRHDEQ9UKU6 1024 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 VPS4AQ9UN37 437 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 HEBP2Q9Y5Z4 205 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 COLEC10Q9Y6Z7 277 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 CREBBPQ92793 2442 aa12.54□□□□□ -0.4
PTCH1-221ENST00000550914 BLACEA4D250 179 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 TTLL8A6PVC2 850 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 STX7O15400 261 aaKnown RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 GPR39O43194 453 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 CBFA2T2O43439 604 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 SPOPO43791 374 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 KLK3P07288 261 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 TPM1P09493 284 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 RAB40ALP0C0E4 278 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 SLC35G4P0C7Q5 338 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 PECAM1P16284 738 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 COMTP21964 271 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 AKT1P31749 480 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 HADHBP55084 474 aaKnown RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 IL10RAQ13651 578 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 CERS6Q6ZMG9 384 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 SPOCD1Q6ZMY3 1216 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 PID1Q7Z2X4 250 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 HPS6Q86YV9 775 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 TMEM126BQ8IUX1 230 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 SLC25A41Q8N5S1 370 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 IPMKQ8NFU5 416 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 CPT1CQ8TCG5 803 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 ADAMTS17Q8TE56 1095 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 INSM2Q96T92 566 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 CCM2Q9BSQ5 444 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 FSD1LQ9BXM9 530 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 WWP1Q9H0M0 922 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 ING2Q9H160 280 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 NHEJ1Q9H9Q4 299 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-221ENST00000550914 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 LRRC4CQ9HCJ2 640 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 ACSS2Q9NR19 701 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 SPTLC3Q9NUV7 552 aa12.53□□□□□ -0.4
PTCH1-221ENST00000550914 LRBAP50851 2863 aa12.52□□□□□ -0.4
PTCH1-221ENST00000550914 FER1L5A0AVI2 2057 aa12.52□□□□□ -0.4
PTCH1-221ENST00000550914 OR6C74A6NCV1 312 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 C5orf60A6NFR6 353 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 C2orf81A6NN90 581 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CEACAM4O75871 244 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 ANXA9O76027 345 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 SORBS2O94875 1100 aaKnown RBP12.52□□□□□ -0.41
PTCH1-221ENST00000550914 PRAMEF1O95521 474 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CA5AP35218 305 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 KPNA2P52292 529 aaKnown RBP12.52□□□□□ -0.41
PTCH1-221ENST00000550914 RPS18P62269 152 aaKnown RBP12.52□□□□□ -0.41
PTCH1-221ENST00000550914 PRKAA1Q13131 559 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 GPS2Q13227 327 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 TAF1AQ15573 450 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-221ENST00000550914 GPR19Q15760 415 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CPZQ66K79 652 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 ZC3H18Q86VM9 953 aaKnown RBP12.52□□□□□ -0.41
PTCH1-221ENST00000550914 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 DSELQ8IZU8 1212 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CPT1BQ92523 772 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 MR1Q95460 341 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CHP1Q99653 195 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 NLNQ9BYT8 704 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 C1GALT1Q9NS00 363 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 POMT2Q9UKY4 750 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 ZNF451Q9Y4E5 1061 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CFAP20Q9Y6A4 193 aaKnown RBP12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CNTRLQ7Z7A1 2325 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 CCDC88CQ9P219 2028 aa12.52□□□□□ -0.41
PTCH1-221ENST00000550914 hCG_1818297A0A087WSY0 165 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 C17orf113A0A1B0GUU1 675 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 AGAP14A8MT82 685 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 MEN1O00255 615 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 BUD23O43709 281 aaKnown RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 SRP72O76094 671 aaKnown RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 ZRANB2O95218 330 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 RALBP11234 206 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 TNNT1P13805 278 aa12.51□□□□□ -0.41
PTCH1-221ENST00000550914 VARSP26640 1264 aaKnown RBP12.51□□□□□ -0.41
PTCH1-221ENST00000550914 PBLDP30039 288 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms