RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 MPGP29372 298 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ATP5C1P36542 298 aaKnown RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 PBX1P40424 430 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 SUMO3P55854 103 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 RPS24P62847 133 aaKnown RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 TUBA4AP68366 448 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 FMO1Q01740 532 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 GRSF1Q12849 480 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 MLC1Q15049 377 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 TAF12Q16514 161 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 CYP1B1Q16678 543 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 C5orf22Q49AR2 442 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 FBXO43Q4G163 708 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 TCP11X2Q5H9J9 407 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 C10orf76Q5T2E6 689 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 MANEALQ5VSG8 457 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 KLHDC7AQ5VTJ3 777 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ANO7Q6IWH7 933 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 DPY19L3Q6ZPD9 716 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 TPGS1Q6ZTW0 290 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 BEND5Q7L4P6 421 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 DNAAF5Q86Y56 855 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF366Q8N895 744 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 MLKLQ8NB16 471 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ABHD11Q8NFV4 315 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 OR56A3Q8NH54 315 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 IRGQQ8WZA9 623 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 CCDC47Q96A33 483 aaKnown RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 HSFY1Q96LI6 401 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF778Q96MU6 729 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 PSMB7Q99436 277 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 NPY6RQ99463 290 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 THAP7Q9BT49 309 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 DPCDQ9BVM2 203 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 NDST4Q9H3R1 872 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 EBF2Q9HAK2 575 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 UBE2TQ9NPD8 197 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 DNAJC17Q9NVM6 304 aaKnown RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 THAP10Q9P2Z0 257 aaPredicted RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 RNF7Q9UBF6 113 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 DNAJC12Q9UKB3 198 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 NENFQ9UMX5 172 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 NFE2L3Q9Y4A8 694 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 SNX10Q9Y5X0 201 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ASXL3Q9C0F0 2248 aa4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ZFC3H1O60293 1989 aaKnown RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 TDRD6O60522 2096 aaKnown RBP4.98□□□□□ -1.61
SCAF11-214ENST00000550893 ITIH6Q6UXX5 1313 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TRPM6Q9BX84 2022 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TCRBV21S2A2A0A5A6 115 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 AP4M1O00189 453 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 NCAM2O15394 837 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 STX10O60499 249 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TSPAN3O60637 253 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF821O75541 412 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 DAB1O75553 588 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 RPP40O75818 363 aaKnown RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 LETM1O95202 739 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 GNA14O95837 355 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 CD160O95971 181 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 RETP07949 1114 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 DLDP09622 509 aaKnown RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 PRR35P0CG20 571 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 UCHL3P15374 230 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 PPP1R2P41236 205 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TNFRSF4P43489 277 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 GABRB2P47870 512 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 NUMBP49757 651 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF81P51508 661 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 E2F1Q01094 437 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 OGDHQ02218 1023 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 GAD2Q05329 585 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 LMAN2Q12907 356 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 SIM2Q14190 667 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 KCNJ12Q14500 433 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF234Q14588 700 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 DRAP1Q14919 205 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 EXOC3L4Q17RC7 722 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 MS4A13Q5J8X5 152 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 KCNT1Q5JUK3 1230 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TRIM72Q6ZMU5 477 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 SLC26A9Q7LBE3 791 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 CHSY1Q86X52 802 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TTC39CQ8N584 583 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ARFGAP1Q8N6T3 406 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF397Q8NF99 534 aaPredicted RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 JOSD2Q8TAC2 188 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 IPO4Q8TEX9 1081 aaKnown RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 IGSF8Q969P0 613 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 SPSB4Q96A44 273 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 PRR25Q96S07 402 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TUBGCP2Q9BSJ2 902 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 BBS2Q9BXC9 721 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 DNAI2Q9GZS0 605 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 MIS12Q9H081 205 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 LHX5Q9H2C1 402 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ARRDC1-AS1Q9H2J1 176 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 SACM1LQ9NTJ5 587 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 PIGVQ9NUD9 493 aa4.97□□□□□ -1.61
SCAF11-214ENST00000550893 TBC1D14Q9P2M4 693 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms