RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ZNF501Q96CX3 271 aaPredicted RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 LINC00615Q96LM1 132 aaPredicted RBP21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 FSD1LQ9BXM9 530 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 GOLPH3Q9H4A6 298 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 KIR3DX1Q9H7L2 352 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 RSPH14Q9UHP6 348 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 SLC24A2Q9UI40 661 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 ARL5AQ9Y689 179 aa21.16■□□□□ 0.98
SMARCC2-210ENST00000550519 SPENQ96T58 3664 aaKnown RBP21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 OR6C74A6NCV1 312 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 SGTAO43765 313 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 AGTP01019 485 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 RPS15P62841 145 aaKnown RBP21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 GPR19Q15760 415 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 BCL7AQ4VC05 210 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 RCOR2Q8IZ40 523 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 OR8K5Q8NH50 307 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 PSMG3-AS1Q96PY0 264 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 GORASP1Q9BQQ3 440 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 LATS2Q9NRM7 1088 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 FARSAQ9Y285 508 aaKnown RBP21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 BTRCQ9Y297 605 aa21.15■□□□□ 0.98
SMARCC2-210ENST00000550519 SPTAN1Q13813 2472 aaKnown RBP21.14■□□□□ 0.98
SMARCC2-210ENST00000550519 SCRG1O75711 98 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 LPOP22079 712 aaPredicted RBP21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 KPNA2P52292 529 aaKnown RBP21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 PDE1BQ01064 536 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 GPS2Q13227 327 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 IL10RAQ13651 578 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 TAF1AQ15573 450 aaPredicted RBP21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 CAPRIN2Q6IMN6 1127 aaKnown RBP21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 RANBP10Q6VN20 620 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 TMEM126BQ8IUX1 230 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 SLC38A9Q8NBW4 561 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 OR4K2Q8NGD2 314 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 NAT14Q8WUY8 206 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 PPM1MQ96MI6 270 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 FICDQ9BVA6 458 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 GBA3Q9H227 469 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 ASB8Q9H765 288 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 MLXIPLQ9NP71 852 aa21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 PCDHGA9Q9Y5G4 932 aaKnown RBP21.14■□□□□ 0.97
SMARCC2-210ENST00000550519 C2orf81A6NN90 581 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 AGAP14A8MT82 685 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 SRP72O76094 671 aaKnown RBP21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 SLC35G4P0C7Q5 338 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 PYGMP11217 842 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 MARCKSL1P49006 195 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 GEMP55040 296 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 XIAPP98170 497 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 TMTC4Q5T4D3 741 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 IZUMO3Q5VZ72 239 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 CPZQ66K79 652 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 ARMC6Q6NXE6 501 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 BBS12Q6ZW61 710 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 MR1Q95460 341 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 RMDN2Q96LZ7 410 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 LRFN5Q96NI6 719 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 FKBPLQ9UIM3 349 aa21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 RP1L1Q8IWN7 2480 aaPredicted RBP21.13■□□□□ 0.97
SMARCC2-210ENST00000550519 C5orf60A6NFR6 353 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 APOC4-APOC2K7ER74 178 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 ANXA9O76027 345 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 APOC2P02655 101 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 NDUFS1P28331 727 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 RBL1P28749 1068 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 ADRA1AP35348 466 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 MSLNQ13421 630 aaPredicted RBP21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 FBXO38Q6PIJ6 1188 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 CNGA4Q8IV77 575 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 CCDC50Q8IVM0 306 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 LILRA3Q8N6C8 439 aaPredicted RBP21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 RBM41Q96IZ5 413 aaKnown RBP21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 SLC25A23Q9BV35 468 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 CHST8Q9H2A9 424 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 C10orf88Q9H8K7 445 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 FAM8A1Q9UBU6 413 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 POMT2Q9UKY4 750 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 COLEC10Q9Y6Z7 277 aa21.12■□□□□ 0.97
SMARCC2-210ENST00000550519 POLBP06746 335 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 KLK3P07288 261 aaPredicted RBP21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 POLR2CP19387 275 aaPredicted RBP21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 ARCN1P48444 511 aaKnown RBP21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 GSDMDP57764 484 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 CHAF1BQ13112 559 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 GSE1Q14687 1217 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 PLEKHS1Q5SXH7 462 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 PRAMEF17Q5VTA0 474 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 PAPD7Q5XG87 772 aaKnown RBP21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 DAAM2Q86T65 1068 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 CFAP206Q8IYR0 622 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 OR4E2Q8NGC2 313 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 ADAMTS17Q8TE56 1095 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 CCM2Q9BSQ5 444 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 HEMGNQ9BXL5 484 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 ING2Q9H160 280 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 C1GALT1Q9NS00 363 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 SOHLH2Q9NX45 425 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 HEBP2Q9Y5Z4 205 aa21.11■□□□□ 0.97
SMARCC2-210ENST00000550519 ARGFXA6NJG6 315 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms