RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 OR5K3A6NET4 321 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 TLCD2A6NGC4 264 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 ERI2A8K979 691 aaKnown RBP10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 GOLGA6L6A8MZA4 724 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 F8W8V4 182 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 H7C0S8 307 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 QSOX1O00391 747 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 IFRD1O00458 451 aaPredicted RBP10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 NKX2-8O15522 239 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 SUV39H1O43463 412 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 SPAG6O75602 509 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 WISP1O95388 367 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 GAS8O95995 478 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 CD151P48509 253 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 PRLHRP49683 370 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 POLE2P56282 527 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 XIAPP98170 497 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 CDC20Q12834 499 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 PRKAA1Q13131 559 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 KCNAB2Q13303 367 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 MSLNQ13421 630 aaPredicted RBP10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 RAD9BQ6WBX8 426 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 DET1Q7L5Y6 550 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 PRICKLE2Q7Z3G6 844 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 CFAP206Q8IYR0 622 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 NXPE1Q8N323 547 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 RNF10Q8N5U6 811 aaKnown RBP10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 STARD8Q92502 1023 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 C12orf66Q96MD2 445 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 INSM2Q96T92 566 aaPredicted RBP10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 TTC1Q99614 292 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 APOL2Q9BQE5 337 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 GORASP1Q9BQQ3 440 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 WWP1Q9H0M0 922 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 RBSNQ9H1K0 784 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 KIR3DX1Q9H7L2 352 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 C10orf88Q9H8K7 445 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 SYTL2Q9HCH5 934 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 ZDHHC3Q9NYG2 299 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 FKBPLQ9UIM3 349 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 LNPEPQ9UIQ6 1025 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 PSMD13Q9UNM6 376 aa10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 REXO2Q9Y3B8 237 aaKnown RBP10.63□□□□□ -0.71
VTI1BP3-201ENST00000550220 GCN1Q92616 2671 aaKnown RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 C21orf140B9A014 251 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 LDB2O43679 373 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 KIF1CO43896 1103 aaKnown RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 KIAA0754O94854 1291 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 AP2A2O94973 939 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 ZBTB11O95625 1053 aaPredicted RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 PBLDP30039 288 aaPredicted RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 DLSTP36957 453 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 CSRP3P50461 194 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 ZNF140P52738 457 aaPredicted RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 TUBB4BP68371 445 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 SH3BP2P78314 561 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 PLOD1Q02809 727 aaPredicted RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 RPA4Q13156 261 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 TUBB3Q13509 450 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 TUBB2AQ13885 445 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 PTPRCAPQ14761 206 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 SKIDA1Q1XH10 827 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 CAPRIN2Q6IMN6 1127 aaKnown RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 DENND5AQ6IQ26 1287 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 FAM83HQ6ZRV2 1179 aaPredicted RBP10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 UNC5BQ8IZJ1 945 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 D2HGDHQ8N465 521 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 FAM71DQ8N9W8 422 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 GALNT6Q8NCL4 622 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 ACVR1CQ8NER5 493 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 HM13Q8TCT9 377 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 STYXQ8WUJ0 223 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 TUBB2BQ9BVA1 445 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 GPR87Q9BY21 358 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 TSGA10Q9BZW7 698 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 CLMPQ9H6B4 373 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 SLC24A2Q9UI40 661 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 PCDHGA6Q9Y5G7 932 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 SDK2Q58EX2 2172 aa10.62□□□□□ -0.71
VTI1BP3-201ENST00000550220 ATMQ13315 3056 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 GPR39O43194 453 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 AP2A1O95782 977 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 POLBP06746 335 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 ACRV1P26436 265 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 CDC25BP30305 580 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 MC4RP32245 332 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 TMPRSS15P98073 1019 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 CACNG1Q06432 222 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 KLF1Q13351 362 aaPredicted RBP10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 ZRANB3Q5FWF4 1079 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 LYPLAL1Q5VWZ2 237 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 KCTD11Q693B1 232 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 C16orf46Q6P387 395 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 TAS2R42Q7RTR8 314 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 ACRBPQ8NEB7 543 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 OR13C4Q8NGS5 318 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 GPR150Q8NGU9 434 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 C9orf43Q8TAL5 461 aaPredicted RBP10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 LCN9Q8WX39 176 aa10.61□□□□□ -0.71
VTI1BP3-201ENST00000550220 CDKN2AIPNLQ96HQ2 116 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms