RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 AURKAO14965 403 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 KMOO15229 486 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 STK17BO94768 372 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 WISP1O95388 367 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 SFTPCP11686 197 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 BPIP17213 487 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 AMD1P17707 334 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 ITGB6P18564 788 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 HLA-DPA1P20036 260 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 TNNT3P45378 269 aaPredicted RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 SEPHS1P49903 392 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 ITGA8P53708 1063 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 UBE2IP63279 158 aaKnown RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 KCNC4Q03721 635 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 FOXM1Q08050 763 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 MSLNQ13421 630 aaPredicted RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 GTF2H3Q13889 308 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 SPARCL1Q14515 664 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 SLC1A5Q15758 541 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 PDPK2PQ6A1A2 396 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 XKR5Q6UX68 686 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 ZDHHC24Q6UX98 284 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 ZNF534Q76KX8 674 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 LINC00523Q86TU6 105 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 PLXDC1Q8IUK5 500 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 TBL1YQ9BQ87 522 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 RHOXF2Q9BQY4 288 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 FICDQ9BVA6 458 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 FAM129AQ9BZQ8 928 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 CASS4Q9NQ75 786 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 PDP2Q9P2J9 529 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 NFKBIL1Q9UBC1 381 aaPredicted RBP13.17□□□□□ -0.3
NUP188-211ENST00000550219 ANAPC5Q9UJX4 755 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 PILRAQ9UKJ1 303 aa13.17□□□□□ -0.3
NUP188-211ENST00000550219 AHCTF1Q8WYP5 2266 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 LOC101059948A0A1B0GTJ6 334 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 GPR89AB7ZAQ6 455 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 POLR1CO15160 346 aaPredicted RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 GPR39O43194 453 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 RASSF9O75901 435 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 UBXN7O94888 489 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 CDK14O94921 469 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 GPR89BP0CG08 455 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 MLNP12872 115 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 ZNF7P17097 686 aaPredicted RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 GRIA1P42261 906 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 MAGEA3P43357 314 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 LMAN1P49257 510 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 POLE2P56282 527 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 CAV1Q03135 178 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 OLIG2Q13516 323 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 CUL1Q13616 776 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 SIRPB2Q5JXA9 342 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 LRRC8BQ6P9F7 803 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 TMEM26Q6ZUK4 368 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 TIPARPQ7Z3E1 657 aaKnown RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 CAND1Q86VP6 1230 aaKnown RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 PTRH1Q86Y79 214 aaKnown RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 IFT20Q8IY31 132 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 EIF1ADQ8N9N8 165 aaKnown RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 UBXN4Q92575 508 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 RSC1A1Q92681 617 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 ELMO2Q96JJ3 720 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 TIMM29Q9BSF4 260 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 FSD1LQ9BXM9 530 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 EPB41L1Q9H4G0 881 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 ZDHHC18Q9NUE0 388 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 GEMIN8Q9NWZ8 242 aaKnown RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 SLC30A1Q9Y6M5 507 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 COL6A6A6NMZ7 2263 aa13.16□□□□□ -0.3
NUP188-211ENST00000550219 HELZ2Q9BYK8 2649 aaKnown RBP13.16□□□□□ -0.3
NUP188-211ENST00000550219 AP3B1O00203 1094 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 CHUKO15111 745 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 NKX2-8O15522 239 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 BUD23O43709 281 aaKnown RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 VEGFDO43915 354 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 MAP4P27816 1152 aaKnown RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 TNFRSF8P28908 595 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 ECHS1P30084 290 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 SLC19A1P41440 591 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 CHRNA4P43681 627 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 CCR10P46092 362 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 LEPRP48357 1165 aaKnown RBP13.15□□□□□ -0.3
NUP188-211ENST00000550219 CLCNKAP51800 687 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 TERF1P54274 439 aa13.15□□□□□ -0.3
NUP188-211ENST00000550219 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms