RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 LRRC70Q7Z2Q7 622 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 RETREG3Q86VR2 466 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 PTRH1Q86Y79 214 aaKnown RBP8.8□□□□□ -1
TMEM116-209ENST00000550020 TMC8Q8IU68 726 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 HID1Q8IV36 788 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 FAM156AQ8NDB6 213 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 OR4F6Q8NGB9 312 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 OR8J3Q8NGG0 315 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 HCAR2Q8TDS4 363 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 LRIG1Q96JA1 1093 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 ZNF597Q96LX8 424 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 APOL5Q9BWW9 433 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 YIPF3Q9GZM5 350 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 PCDHAC1Q9H158 963 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 ALG2Q9H553 416 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 SLC32A1Q9H598 525 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 C11orf49Q9H6J7 331 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 VCX3AQ9NNX9 186 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 SMOXQ9NWM0 555 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 ANAPC2Q9UJX6 822 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 IKZF3Q9UKT9 509 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 CNOT6Q9ULM6 557 aaKnown RBP8.8□□□□□ -1
TMEM116-209ENST00000550020 RWDD3Q9Y3V2 267 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 PCDHA9Q9Y5H5 950 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 IRAK3Q9Y616 596 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 COL4A6Q14031 1691 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 CHD5Q8TDI0 1954 aa8.8□□□□□ -1
TMEM116-209ENST00000550020 A0A1W2PRU2 124 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 EIF4E1BA6NMX2 242 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 WASH3PC4AMC7 463 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 GAPDHSO14556 408 aaPredicted RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 OR7A17O14581 309 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 SMAD6O43541 496 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 NUAK1O60285 661 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 XYLBO75191 536 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 KCNH1O95259 989 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CLDN9O95484 217 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CLPTM1O96005 669 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 MYCP01106 439 aaPredicted RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 FTH1P02794 183 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 ASLP04424 464 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 HNRNPA1P09651 372 aaKnown RBP eCLIP8.79□□□□□ -1
TMEM116-209ENST00000550020 PABPC4LP0CB38 370 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 PRPS2P11908 318 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 PABPC1P11940 636 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 SLC2A4P14672 509 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 ACPPP15309 386 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CD1EP15812 388 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TCF3P15923 654 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 XPAP23025 273 aaPredicted RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 PAX7P23759 505 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 VARSP26640 1264 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 HOXA9P31269 272 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CD70P32970 193 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 GGT5P36269 586 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 ATXN3P54252 364 aaPredicted RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 DIO3P55073 304 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 NME5P56597 212 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 DCDC1P59894 354 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 DEFB103AP81534 67 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TXNL4AP83876 142 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 ECT2LQ008S8 904 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 LIPEQ05469 1076 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 PWP1Q13610 501 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 KCNC3Q14003 757 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TLR1Q15399 786 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 GGTA1PQ4G0N0 100 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 DGKKQ5KSL6 1271 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TMTC4Q5T4D3 741 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 KRT80Q6KB66 452 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 PPP4R4Q6NUP7 873 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 LETMD1Q6P1Q0 360 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CRTC1Q6UUV9 634 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CYP20A1Q6UW02 462 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CYP2R1Q6VVX0 501 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 GDPD4Q6W3E5 623 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TRIM46Q7Z4K8 759 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 RAVER1Q8IY67 606 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 CMTM8Q8IZV2 173 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 LILRA2Q8N149 483 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 GALNT4Q8N4A0 578 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 MFSD2AQ8NA29 543 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TTC16Q8NEE8 873 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TRPV3Q8NET8 790 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 WFDC5Q8TCV5 224 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 MCOLN3Q8TDD5 553 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 ATL1Q8WXF7 558 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 AUTS2Q8WXX7 1259 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 STARD8Q92502 1023 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 BHMTQ93088 406 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TMEM125Q96AQ2 219 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 RHBDF1Q96CC6 855 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CENPNQ96H22 339 aaPredicted RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 CNBD2Q96M20 576 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 CORO1BQ9BR76 489 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 C17orf80Q9BSJ5 609 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 TNKS2Q9H2K2 1166 aa8.79□□□□□ -1
TMEM116-209ENST00000550020 NSUN3Q9H649 340 aaKnown RBP8.79□□□□□ -1
TMEM116-209ENST00000550020 RMND5AQ9H871 391 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms