RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 KIAA0754O94854 1291 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 ZIC2O95409 532 aaPredicted RBP15.95■□□□□ 0.14
VPS29-207ENST00000549970 PRSS56P0CW18 603 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 ATP1B2P14415 290 aaPredicted RBP15.95■□□□□ 0.14
VPS29-207ENST00000549970 NELFEP18615 380 aaKnown RBP15.95■□□□□ 0.14
VPS29-207ENST00000549970 STAT5AP42229 794 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 IL11RAQ14626 422 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 BORAQ6PGQ7 559 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 TAS2R42Q7RTR8 314 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 GALNT6Q8NCL4 622 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 HM13Q8TCT9 377 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 ATG4AQ8WYN0 398 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 C19orf43Q9BQ61 176 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 EFHD1Q9BUP0 239 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 HRASLS2Q9NWW9 162 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 IL17BQ9UHF5 180 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 LNPEPQ9UIQ6 1025 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 RPS6KL1Q9Y6S9 549 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 CCDC78A2IDD5 438 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 KLHL33A6NCF5 533 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 OR5K3A6NET4 321 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 GOLGA6L6A8MZA4 724 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 J3QKU1 62 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 SLC28A2O43868 658 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 AP2A1O95782 977 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 ITGB6P18564 788 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 ACRV1P26436 265 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 NFKB2Q00653 900 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 MAP7Q14244 749 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 KRT33BQ14525 404 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 KCNAB1Q14722 419 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 GPR33Q49SQ1 333 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 DNTTIP2Q5QJE6 756 aaKnown RBP15.94■□□□□ 0.14
VPS29-207ENST00000549970 SEL1L2Q5TEA6 688 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 C6orf15Q6UXA7 325 aaPredicted RBP15.94■□□□□ 0.14
VPS29-207ENST00000549970 PRICKLE2Q7Z3G6 844 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 SERPINA9Q86WD7 417 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 OOSP2Q86WS3 158 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 PPP1R3BQ86XI6 285 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 SIDT2Q8NBJ9 832 aaKnown RBP15.94■□□□□ 0.14
VPS29-207ENST00000549970 HEXDCQ8WVB3 486 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 STARD8Q92502 1023 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 UBXN4Q92575 508 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 STAMBPL1Q96FJ0 436 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 MAP3K3Q99759 626 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 FAM117AQ9C073 453 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 NLE1Q9NVX2 485 aaPredicted RBP15.94■□□□□ 0.14
VPS29-207ENST00000549970 ZDHHC3Q9NYG2 299 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 SLC24A2Q9UI40 661 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 GUCA1BQ9UMX6 200 aa15.94■□□□□ 0.14
VPS29-207ENST00000549970 HEMK1Q9Y5R4 338 aaPredicted RBP15.94■□□□□ 0.14
VPS29-207ENST00000549970 MRPS18BQ9Y676 258 aaKnown RBP15.94■□□□□ 0.14
VPS29-207ENST00000549970 UBA6A0AVT1 1052 aaPredicted RBP15.93■□□□□ 0.14
VPS29-207ENST00000549970 H7C0S8 307 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 PYCARD-AS1I3L0S3 204 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 SPAG6O75602 509 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 EBLN1P0CF75 366 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 SFTPCP11686 197 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 FGF5P12034 268 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 FOLR1P15328 257 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 ARCN1P48444 511 aaKnown RBP15.93■□□□□ 0.14
VPS29-207ENST00000549970 ARL4DP49703 201 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CDC20Q12834 499 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 TUBB3Q13509 450 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CAPRIN2Q6IMN6 1127 aaKnown RBP15.93■□□□□ 0.14
VPS29-207ENST00000549970 ARMC6Q6NXE6 501 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 C16orf46Q6P387 395 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CERS6Q6ZMG9 384 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 RNF10Q8N5U6 811 aaKnown RBP15.93■□□□□ 0.14
VPS29-207ENST00000549970 STYXQ8WUJ0 223 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CDKN2AIPNLQ96HQ2 116 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 SLC41A2Q96JW4 573 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CATSPER2Q96P56 530 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 ALS2CR12Q96Q35 445 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CCM2Q9BSQ5 444 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 KIR3DX1Q9H7L2 352 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 COG4Q9H9E3 785 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 PDE7BQ9NP56 450 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 STARD5Q9NSY2 213 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 SEMA5BQ9P283 1151 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 CROTQ9UKG9 612 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 RARRES3Q9UL19 164 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 COLEC10Q9Y6Z7 277 aa15.93■□□□□ 0.14
VPS29-207ENST00000549970 PIKFYVEQ9Y2I7 2098 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 SPTA1P02549 2419 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 IGLV3-16A0A075B6K0 115 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 TRBV5-4A0A0C4DH59 114 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 OR6C74A6NCV1 312 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 TLCD2A6NGC4 264 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 PSMD3O43242 534 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 TIAF1O95411 115 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 IFNB1P01574 187 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 F8A1P23610 371 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 NDUFS1P28331 727 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 DLSTP36957 453 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 POLE2P56282 527 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
VPS29-207ENST00000549970 CCDC38Q502W7 563 aa15.92■□□□□ 0.14
VPS29-207ENST00000549970 ATP1A1-AS1Q5TC04 95 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms