RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 PABPC1P11940 636 aaKnown RBP16.04■□□□□ 0.16
CUX1-213ENST00000549414 DLG1Q12959 904 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 PPP2R2DQ66LE6 453 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 PROSER1Q86XN7 944 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 AADATQ8N5Z0 425 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 OR2AP1Q8NGE2 309 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 TIFAQ96CG3 184 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 DUS2Q9NX74 493 aaKnown RBP16.04■□□□□ 0.16
CUX1-213ENST00000549414 KLHL28Q9NXS3 571 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 ENTPD4Q9Y227 616 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 OCM2P0CE71 109 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 OCMP0CE72 109 aaPredicted RBP16.04■□□□□ 0.16
CUX1-213ENST00000549414 NR4A1P22736 598 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 UFM1P61960 85 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 TGM3Q08188 693 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 INO80DQ53TQ3 878 aaPredicted RBP16.04■□□□□ 0.16
CUX1-213ENST00000549414 RABL3Q5HYI8 236 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 INTS11Q5TA45 600 aaKnown RBP16.04■□□□□ 0.16
CUX1-213ENST00000549414 CASP12Q6UXS9 341 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 ZNF605Q86T29 641 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 TRIM69Q86WT6 500 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 SLC13A3Q8WWT9 602 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 KLK6Q92876 244 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 C1orf74Q96LT6 269 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 NDRG2Q9UN36 371 aaKnown RBP16.04■□□□□ 0.16
CUX1-213ENST00000549414 AP3M1Q9Y2T2 418 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 SH3GLB1Q9Y371 365 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 WNT6Q9Y6F9 365 aa16.04■□□□□ 0.16
CUX1-213ENST00000549414 TCRBV5S1A1TA0A578 114 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 K7EPI3 171 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 IGFBP6P24592 240 aaPredicted RBP16.03■□□□□ 0.16
CUX1-213ENST00000549414 YAP1P46937 504 aaKnown RBP16.03■□□□□ 0.16
CUX1-213ENST00000549414 CCNHP51946 323 aaPredicted RBP16.03■□□□□ 0.16
CUX1-213ENST00000549414 ERVK-8P63133 956 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 CAP1Q01518 475 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 BROXQ5VW32 411 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 ZCCHC7Q8N3Z6 543 aaKnown RBP16.03■□□□□ 0.16
CUX1-213ENST00000549414 ZNF540Q8NDQ6 660 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 OR4A15Q8NGL6 344 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 UBE2E3Q969T4 207 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 ROPN1LQ96C74 230 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 FERD3LQ96RJ6 166 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 CHID1Q9BWS9 393 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 INSL5Q9Y5Q6 135 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 FPGTO14772 594 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 KDELR3O43731 214 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 DGKGP49619 791 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 ARSIQ5FYB1 569 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 CLLU1OSQ5K130 101 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 ATAD3BQ5T9A4 648 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
CUX1-213ENST00000549414 SATL1Q86VE3 508 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 MAPK15Q8TD08 544 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 IGSF21Q96ID5 467 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 GAS2L1Q99501 681 aaPredicted RBP16.03■□□□□ 0.16
CUX1-213ENST00000549414 PKP2Q99959 881 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 CCDC106Q9BWC9 280 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 C1orf109Q9NX04 203 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 CDK5RAP2Q96SN8 1893 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 ECM29Q5VYK3 1845 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 K7ERQ8 282 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 PKDCCQ504Y2 493 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 SPACA7Q96KW9 195 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 OSBPL6Q9BZF3 934 aa16.03■□□□□ 0.16
CUX1-213ENST00000549414 STK19P49842 368 aaPredicted RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 CDKN2DP55273 166 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 PRKCQQ04759 706 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 SLC2A7Q6PXP3 512 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 VPS4AQ9UN37 437 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 SAP18O00422 153 aaKnown RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 SUV39H1O43463 412 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 RPS9P46781 194 aaKnown RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 RPS14P62263 151 aaKnown RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 MRPS15P82914 257 aaKnown RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 SPIBQ01892 262 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 FPGSQ05932 587 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 PHKG1Q16816 387 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 PM20D1Q6GTS8 502 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 C17orf64Q86WR6 236 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 OR4F6Q8NGB9 312 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 OR52J3Q8NH60 311 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 PHF10Q8WUB8 498 aaKnown RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 LRRC58Q96CX6 371 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 PSKH2Q96QS6 385 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 NUSAP1Q9BXS6 441 aaKnown RBP16.02■□□□□ 0.16
CUX1-213ENST00000549414 KLHL20Q9Y2M5 609 aa16.02■□□□□ 0.16
CUX1-213ENST00000549414 SDHDO14521 159 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 RNASEH2AO75792 299 aaKnown RBP16.02■□□□□ 0.15
CUX1-213ENST00000549414 NR2F1P10589 423 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 TNNI3P19429 210 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 SLC6A2P23975 617 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 ST13P50502 369 aaKnown RBP16.02■□□□□ 0.15
CUX1-213ENST00000549414 C2orf80Q0P641 193 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 ZNF678Q5SXM1 525 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 KIAA0319Q5VV43 1072 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 OR10Q1Q8NGQ4 319 aa16.02■□□□□ 0.15
CUX1-213ENST00000549414 CENPNQ96H22 339 aaPredicted RBP16.02■□□□□ 0.15
CUX1-213ENST00000549414 VPS35Q96QK1 796 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms