RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 FAM217AQ8IXS0 508 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 DHRSXQ8N5I4 330 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 MYLIPQ8WY64 445 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PRKD2Q9BZL6 878 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 FANCEQ9HB96 536 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 AGO1Q9UL18 857 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 CORINQ9Y5Q5 1042 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ZFP37Q9Y6Q3 630 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ILVBLA1L0T0 632 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 KDELR3O43731 214 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 COL6A2P12110 1019 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 SLC6A2P23975 617 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 RXRGP48443 463 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 NUP107P57740 925 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PHEXP78562 749 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 DDX39BQ13838 428 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF783Q6ZMS7 281 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 MBOAT1Q6ZNC8 495 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 SMYD1Q8NB12 490 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PNPT1Q8TCS8 783 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 MUS81Q96NY9 551 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 NPLQ9BXD5 320 aaPredicted RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 LRRC3Q9BY71 257 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 PLGRKTQ9HBL7 147 aa10.94□□□□□ -0.66
LINC00661-204ENST00000549354 TRNAU1APQ9NX07 287 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 RBMX2Q9Y388 322 aaKnown RBP10.94□□□□□ -0.66
LINC00661-204ENST00000549354 SYNCRIPO60506 623 aaKnown RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 SNX2O60749 519 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 OCM2P0CE71 109 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 OCMP0CE72 109 aaPredicted RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 MATN1P21941 496 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 GPX3P22352 226 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 DNAJB1P25685 340 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 CORO1AP31146 461 aaKnown RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 RGRP47804 291 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ADRM1Q16186 407 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 TAF12Q16514 161 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF678Q5SXM1 525 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 KIAA0930Q6ICG6 404 aaPredicted RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 GALNT18Q6P9A2 607 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 Q6ZNB5 142 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 PIWIL3Q7Z3Z3 882 aaKnown RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ITIH5Q86UX2 942 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 DENND1CQ8IV53 801 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 FBXO39Q8N4B4 442 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 OR13J1Q8NGT2 312 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 LRRC58Q96CX6 371 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 KCTD14Q9BQ13 255 aaPredicted RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 RPF2Q9H7B2 306 aaKnown RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 TBC1D23Q9NUY8 699 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 INVSQ9Y283 1065 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 MYLKQ15746 1914 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 A0A087X1B8 175 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 C2orf78A6NCI8 922 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 K7EPI3 171 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 CD3EAPO15446 510 aaKnown RBP10.93□□□□□ -0.66
LINC00661-204ENST00000549354 E2F6O75461 281 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 FGF18O76093 207 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ACRP10323 421 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 GSK3BP49841 420 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 PFKPQ01813 784 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 LIPEQ05469 1076 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 ZBED5Q49AG3 693 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 IL27RAQ6UWB1 636 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 BTLAQ7Z6A9 289 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 TMEM126BQ8IUX1 230 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 PHACTR4Q8IZ21 702 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 SDCCAG3Q96C92 435 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 YME1L1Q96TA2 773 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 MGME1Q9BQP7 344 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 HGH1Q9BTY7 390 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 TUBB1Q9H4B7 451 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 SMURF2Q9HAU4 748 aa10.93□□□□□ -0.66
LINC00661-204ENST00000549354 MROH6A6NGR9 719 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PRRG1O14668 218 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 XYLBO75191 536 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 RBP1P09455 135 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 ATXN1LP0C7T5 689 aaKnown RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 HTR6P50406 440 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 KPNA2P52292 529 aaKnown RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 PTGR1Q14914 329 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 NR6A1Q15406 480 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 NANOGP8Q6NSW7 305 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 GALNT7Q86SF2 657 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 LMNTD1Q8N9Z9 388 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 WBP2Q969T9 261 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 AMBNQ9NP70 447 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 LATS2Q9NRM7 1088 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 CCM2LQ9NUG4 571 aaPredicted RBP10.92□□□□□ -0.66
LINC00661-204ENST00000549354 IRAK3Q9Y616 596 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 A0A1B0GVM2 712 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 SH3PXD2BA1X283 911 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 FXYD1O00168 92 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 AZIN1O14977 448 aa10.92□□□□□ -0.66
LINC00661-204ENST00000549354 ALPIP09923 528 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms