RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NFKBIL1Q9UBC1 381 aaPredicted RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 EPHA6Q9UF33 1036 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 OSGIN2Q9Y236 505 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 ADGRG1Q9Y653 693 aa8.29□□□□□ -1.08
TROAP-208ENST00000548817 MAP1AP78559 2803 aaPredicted RBP8.29□□□□□ -1.08
TROAP-208ENST00000548817 GOLGA6L19H0YKK7 550 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 PMPCBO75439 489 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 NDST3O95803 873 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 ALPPP05187 535 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 TPM3P06753 285 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 KLK3P07288 261 aaPredicted RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 EDN3P14138 238 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 TAS2R40P59535 323 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 FANCCQ00597 558 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 SLC10A2Q12908 348 aaPredicted RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 ZBTB17Q13105 803 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 XRCC4Q13426 336 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 LAMB3Q13751 1172 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 KRT33BQ14525 404 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 MESDQ14696 234 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 SLC14A2Q15849 920 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 PPP2R5EQ16537 467 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 ZNF630Q2M218 657 aaPredicted RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 VWA2Q5GFL6 755 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 DNTTIP2Q5QJE6 756 aaKnown RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 LDLRAP1Q5SW96 308 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 MED25Q71SY5 747 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 KMT5CQ86Y97 462 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 RFX6Q8HWS3 928 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 TTC30BQ8N4P2 665 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 BEND7Q8N7W2 519 aaPredicted RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 CNTD1Q8N815 330 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 ADAMTS17Q8TE56 1095 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 TM9SF4Q92544 642 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 MR1Q95460 341 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 RELTQ969Z4 430 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 C14orf79Q96F83 325 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 VPS35Q96QK1 796 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 CEP41Q9BYV8 373 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 RAB33BQ9H082 229 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 ILKAPQ9H0C8 392 aaPredicted RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 TRABDQ9H4I3 376 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 FANCEQ9HB96 536 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 GLOD4Q9HC38 313 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 BPIFA1Q9NP55 256 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 ZNHIT6Q9NWK9 470 aaKnown RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 CAPN11Q9UMQ6 739 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 FARSAQ9Y285 508 aaKnown RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 PCDHGA10Q9Y5H3 936 aa8.28□□□□□ -1.08
TROAP-208ENST00000548817 DNMT3AQ9Y6K1 912 aaPredicted RBP8.28□□□□□ -1.08
TROAP-208ENST00000548817 STAB1Q9NY15 2570 aa8.27□□□□□ -1.08
TROAP-208ENST00000548817 A0A0A6YYK5 440 aaPredicted RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 ZNF487B1APH4 448 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 E2F3O00716 465 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 PRICKLE3O43900 615 aaPredicted RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 CPNE3O75131 537 aaKnown RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 POP7O75817 140 aaKnown RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 IPO13O94829 963 aaKnown RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 TMEM63AO94886 807 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 NADKO95544 446 aaPredicted RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 MSH3P20585 1137 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 FECHP22830 423 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 HSD11B2P80365 405 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 IL10RAQ13651 578 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 ITGA9Q13797 1035 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 RPE65Q16518 533 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 LONRF2Q1L5Z9 754 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 ATP13A5Q4VNC0 1218 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 TEX44Q53QW1 395 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 PWWP2BQ6NUJ5 590 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 TMEM220Q6QAJ8 160 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 KCNMB4Q86W47 210 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 OOSP2Q86WS3 158 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 TMEM126BQ8IUX1 230 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 OR8K5Q8NH50 307 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 COG1Q8WTW3 980 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 RAPGEF5Q92565 580 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 EID2BQ96D98 161 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 SLC41A2Q96JW4 573 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 ZNF514Q96K75 400 aaPredicted RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 TRIB3Q96RU7 358 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 CD180Q99467 661 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 TMUB1Q9BVT8 246 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 FGF21Q9NSA1 209 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 KCND1Q9NSA2 647 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 IMP3Q9NV31 184 aaKnown RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 HRASLS2Q9NWW9 162 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 SOHLH2Q9NX45 425 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 HACD3Q9P035 362 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 FAM153AQ9UHL3 310 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 PSMD13Q9UNM6 376 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 NTNG1Q9Y2I2 539 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 PKP3Q9Y446 797 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.27□□□□□ -1.09
TROAP-208ENST00000548817 NSD1Q96L73 2696 aaPredicted RBP8.27□□□□□ -1.09
TROAP-208ENST00000548817 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 ACANP16112 2415 aa8.27□□□□□ -1.09
TROAP-208ENST00000548817 FER1L5A0AVI2 2057 aa8.26□□□□□ -1.09
TROAP-208ENST00000548817 IGHV5-51A0A0C4DH38 117 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms