RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NELFEP18615 380 aaKnown RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 ACRV1P26436 265 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 PBLDP30039 288 aaPredicted RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 CA5AP35218 305 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 FDFT1P37268 417 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 CD151P48509 253 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 LMAN1P49257 510 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 SEPHS1P49903 392 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 GDF10P55107 478 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 MC1RQ01726 317 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 CDH17Q12864 832 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 RPA4Q13156 261 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 POU6F1Q14863 301 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 ZRANB3Q5FWF4 1079 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 ARMC6Q6NXE6 501 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 C4orf22Q6V702 233 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 NLRP9Q7RTR0 991 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 TAS2R42Q7RTR8 314 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 OOSP2Q86WS3 158 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 SLC13A5Q86YT5 568 aaPredicted RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 CCDC89Q8N998 374 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 DNAAF3Q8N9W5 541 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 MAIP1Q8WWC4 291 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 RSC1A1Q92681 617 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 PMEPA1Q969W9 287 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 SLC45A3Q96JT2 553 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 DNAJC1Q96KC8 554 aaKnown RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 CATSPER2Q96P56 530 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 FCRL4Q96PJ5 515 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 OR6C1Q96RD1 312 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 INSM2Q96T92 566 aaPredicted RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 WWP1Q9H0M0 922 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 KIR3DX1Q9H7L2 352 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 GPN2Q9H9Y4 310 aaPredicted RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 PDE7BQ9NP56 450 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 HRASLS2Q9NWW9 162 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 SIDT1Q9NXL6 827 aaKnown RBP11.13□□□□□ -0.63
BEST3-209ENST00000548658 SEMA5BQ9P283 1151 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 ZKSCAN5Q9Y2L8 839 aa11.13□□□□□ -0.63
BEST3-209ENST00000548658 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 TRBV5-4A0A0C4DH59 114 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 TCRBV7S2A1N4TA0A589 114 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 UBA6A0AVT1 1052 aaPredicted RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 HEATR9A2RTY3 570 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 OR5K3A6NET4 321 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 MROH6A6NGR9 719 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 ZNF891A8MT65 544 aaPredicted RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 AP3B1O00203 1094 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 MATN2O00339 956 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 IFRD1O00458 451 aaPredicted RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 SUN1O94901 812 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 IFNB1P01574 187 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 MT-ND3P03897 115 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 POLBP06746 335 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 CCNYL3P0C7X3 344 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 FGF5P12034 268 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 LIFP15018 202 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 PSMA3P25788 255 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 PPARGP37231 505 aaPredicted RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 NSG1P42857 185 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 LEPRP48357 1165 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 ARL4DP49703 201 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 ACY1Q03154 408 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 PRKAA1Q13131 559 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 SEPT6Q14141 434 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 LY6DQ14210 128 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 ITIH4Q14624 930 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 CCNG2Q16589 344 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
BEST3-209ENST00000548658 DNTTIP2Q5QJE6 756 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 MEI1Q5TIA1 1274 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 LYPLAL1Q5VWZ2 237 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 FAM92BQ6ZTR7 304 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 SERPINA9Q86WD7 417 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 PPP1R3BQ86XI6 285 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 RASGRP3Q8IV61 690 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 PEX13Q92968 403 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.12□□□□□ -0.63
BEST3-209ENST00000548658 SLC12A9Q9BXP2 914 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 ULBP3Q9BZM4 244 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 FAM96AQ9H5X1 160 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 APMAPQ9HDC9 416 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 PAK5Q9P286 719 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 SLC24A2Q9UI40 661 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 RIMKLBQ9ULI2 386 aa11.12□□□□□ -0.63
BEST3-209ENST00000548658 ZNF106Q9H2Y7 1883 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 SMG1Q96Q15 3661 aaKnown RBP11.12□□□□□ -0.63
BEST3-209ENST00000548658 TLCD2A6NGC4 264 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 B8ZZF3 427 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 MAP3K7O43318 606 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 SGTAO43765 313 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 KIF1CO43896 1103 aaKnown RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 DLGAP3O95886 979 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 ADRA1DP25100 572 aa11.11□□□□□ -0.63
BEST3-209ENST00000548658 MSNP26038 577 aaKnown RBP11.11□□□□□ -0.63
BEST3-209ENST00000548658 HSD11B2P80365 405 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms