RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC7A5P2Q9GIP4 190 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 KLHL25Q9H0H3 589 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 SEMA5BQ9P283 1151 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 NFKBIL1Q9UBC1 381 aaPredicted RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 ZNF451Q9Y4E5 1061 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 PCDHGA9Q9Y5G4 932 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 UTP20O75691 2785 aaKnown RBP11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 PCSK5Q92824 1860 aa11.66□□□□□ -0.54
TRAFD1-205ENST00000548277 GLYATL1P3A0A0U1RQE8 302 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 MEN1O00255 615 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 CBFA2T2O43439 604 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 KCNJ13O60928 360 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 SORBS2O94875 1100 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 NFKB1P19838 968 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 MSH3P20585 1137 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 LPOP22079 712 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 CD68P34810 354 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 HMGCLP35914 325 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 ITGA1P56199 1179 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 WNT3AP56704 352 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 LAMB3Q13751 1172 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC18A3Q16572 532 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 SKOR2Q2VWA4 1001 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 PTCHD3Q3KNS1 767 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 LDLRAP1Q5SW96 308 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 METRNLQ641Q3 311 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 DAAM2Q86T65 1068 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 ZC3H18Q86VM9 953 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 BPHLQ86WA6 291 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 KMT5CQ86Y97 462 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 RHOT1Q8IXI2 618 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 CFAP206Q8IYR0 622 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 LILRA3Q8N6C8 439 aaPredicted RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 RBMXL3Q8N7X1 1067 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 IPMKQ8NFU5 416 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 DNAJC7Q99615 494 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 ZCCHC2Q9C0B9 1178 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 DEF6Q9H4E7 631 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 MLXIPLQ9NP71 852 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 IL17CQ9P0M4 197 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 FAM153AQ9UHL3 310 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 SLC24A2Q9UI40 661 aa11.65□□□□□ -0.54
TRAFD1-205ENST00000548277 USP9XQ93008 2570 aaPredicted RBP11.65□□□□□ -0.55
TRAFD1-205ENST00000548277 LOC285095A0A1B0GVY8 99 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 GSAPA4D1B5 854 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 TMEM150CB9EJG8 249 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 MASP2O00187 686 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 AKR1B10O60218 316 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 DPM1O60762 260 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 OTX2P32243 289 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 DMPKQ09013 629 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 ABRQ12979 859 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 NR6A1Q15406 480 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 ASTE1Q2TB18 679 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 KDELC1Q6UW63 502 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 MFSD7Q6UXD7 560 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 DSELQ8IZU8 1212 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 CISD2Q8N5K1 135 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 ZBTB2Q8N680 514 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 Q8NA96 180 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 PHC3Q8NDX5 983 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 ZNF398Q8TD17 642 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 CPT1BQ92523 772 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 HAUS1Q96CS2 278 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 TEKT5Q96M29 485 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 OLFM3Q96PB7 478 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 FERD3LQ96RJ6 166 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 SRPK1Q96SB4 655 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 FAM96AQ9H5X1 160 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 C10orf88Q9H8K7 445 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 ZNHIT6Q9NWK9 470 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 KLHL8Q9P2G9 620 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 TCFL5Q9UL49 500 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 PKP3Q9Y446 797 aa11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 DIDO1Q9BTC0 2240 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-205ENST00000548277 SVILO95425 2214 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 SSU72P8A0A1W2PR75 194 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 MGAT4DA6NG13 374 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 GAPDHSO14556 408 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 STX7O15400 261 aaKnown RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 LDB2O43679 373 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 AGTP01019 485 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 TMEM253P0C7T8 217 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 PVRP15151 417 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 PECAM1P16284 738 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 ZFXP17010 805 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 HLA-DPA1P20036 260 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 CYP2A7P20853 494 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 PREPP48147 710 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 LMAN1P49257 510 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 VAV2P52735 878 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 GSDMDP57764 484 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 TMPRSS15P98073 1019 aa11.63□□□□□ -0.55
TRAFD1-205ENST00000548277 WASHC5Q12768 1159 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms