RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 FAM83HQ6ZRV2 1179 aaPredicted RBP16■□□□□ 0.15
HECTD4-206ENST00000548140 TBC1D1Q86TI0 1168 aaPredicted RBP16■□□□□ 0.15
HECTD4-206ENST00000548140 NKAPQ8N5F7 415 aaKnown RBP16■□□□□ 0.15
HECTD4-206ENST00000548140 EEF1AKMT1Q8WVE0 214 aa16■□□□□ 0.15
HECTD4-206ENST00000548140 ANKRD49Q8WVL7 239 aa16■□□□□ 0.15
HECTD4-206ENST00000548140 ATOH1Q92858 354 aaPredicted RBP16■□□□□ 0.15
HECTD4-206ENST00000548140 PKNOX2Q96KN3 472 aa16■□□□□ 0.15
HECTD4-206ENST00000548140 ATP6V1G3Q96LB4 118 aa16■□□□□ 0.15
HECTD4-206ENST00000548140 SMC6Q96SB8 1091 aa16■□□□□ 0.15
HECTD4-206ENST00000548140 SENP1Q9P0U3 644 aa16■□□□□ 0.15
HECTD4-206ENST00000548140 H3BM21 787 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 GPC4O75487 556 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 WISP3O95389 354 aaPredicted RBP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 SYF2O95926 243 aaKnown RBP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CCDC166P0CW27 439 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CBSLP0DN79 551 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 AK4P27144 223 aaPredicted RBP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CBSP35520 551 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 MPLP40238 635 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 PREPP48147 710 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 HNRNPKP61978 463 aaKnown RBP eCLIP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 DMPKQ09013 629 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 ILF3Q12906 894 aaKnown RBP eCLIP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CSHL1Q14406 222 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 TTMPQ5BVD1 217 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 TRIM61Q5EBN2 209 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 LAIR1Q6GTX8 287 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 SH2D5Q6ZV89 423 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CCDC91Q7Z6B0 441 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 EXOC3L1Q86VI1 746 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 VRK3Q8IV63 474 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 SPATA6LQ8N4H0 392 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CCL4L1Q8NHW4 92 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 LINGO1Q96FE5 620 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 UNKQ9C0B0 810 aaKnown RBP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 IRF2BPLQ9H1B7 796 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 ERVMER34-1Q9H9K5 563 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 FSCN3Q9NQT6 498 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.99■□□□□ 0.15
HECTD4-206ENST00000548140 SLC6A14Q9UN76 642 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 CDYLQ9Y232 598 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 PCDHGA5Q9Y5G8 931 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 ST14Q9Y5Y6 855 aa15.99■□□□□ 0.15
HECTD4-206ENST00000548140 SLCO2B1O94956 709 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 IDSP22304 550 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 PDHA2P29803 388 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 CCNFP41002 786 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 ACTR1BP42025 376 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 ACTR1AP61163 376 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 MAGOHP61326 146 aaKnown RBP15.98■□□□□ 0.15
HECTD4-206ENST00000548140 PLOD1Q02809 727 aaPredicted RBP15.98■□□□□ 0.15
HECTD4-206ENST00000548140 SLC18A2Q05940 514 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 GRIK2Q13002 908 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 GPS2Q13227 327 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 C1orf61Q13536 156 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 GBX1Q14549 363 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 CCDC6Q16204 474 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 HSP90B2PQ58FF3 399 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 PRRT3Q5FWE3 981 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 METRNLQ641Q3 311 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 SLC23A3Q6PIS1 610 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 SLC30A9Q6PML9 568 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 XKR5Q6UX68 686 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 KCTD4Q8WVF5 259 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 SKA2Q8WVK7 121 aaPredicted RBP15.98■□□□□ 0.15
HECTD4-206ENST00000548140 GLMNQ92990 594 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 NXNL1Q96CM4 212 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 TLCD1Q96CP7 247 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 UBXN10Q96LJ8 280 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 TSNARE1Q96NA8 513 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 LRRC61Q9BV99 259 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 GSDMCQ9BYG8 508 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 CAPN10Q9HC96 672 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 PSMD13Q9UNM6 376 aa15.98■□□□□ 0.15
HECTD4-206ENST00000548140 RUVBL2Q9Y230 463 aaKnown RBP15.98■□□□□ 0.15
HECTD4-206ENST00000548140 WDFY4Q6ZS81 3184 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 COPEO14579 308 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 SNX2O60749 519 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 LRP4O75096 1905 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 SPAG7O75391 227 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 TOP3BO95985 862 aaKnown RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 LTA4HP09960 611 aaKnown RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 ENO3P13929 434 aaPredicted RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 CREB1P16220 341 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 RPL10P27635 214 aaKnown RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 SLC26A3P40879 764 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 DLG1Q12959 904 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 RPA4Q13156 261 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 SEPT7Q16181 437 aaKnown RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 FAM83EQ2M2I3 478 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 PIWIL4Q7Z3Z4 852 aaKnown RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 TAF8Q7Z7C8 310 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 NRROSQ86YC3 692 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 CENPLQ8N0S6 344 aaPredicted RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 MYO1HQ8N1T3 1032 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 PLD6Q8N2A8 252 aaKnown RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 GPBAR1Q8TDU6 330 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 LMX1AQ8TE12 382 aa15.97■□□□□ 0.15
HECTD4-206ENST00000548140 ELF4Q99607 663 aaPredicted RBP15.97■□□□□ 0.15
HECTD4-206ENST00000548140 NUSAP1Q9BXS6 441 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms