RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZMYND15Q9H091 742 aa18.32■□□□□ 0.52
PRPF40B-206ENST00000547764 EPB41L1Q9H4G0 881 aa18.32■□□□□ 0.52
PRPF40B-206ENST00000547764 SAMD15Q9P1V8 674 aa18.32■□□□□ 0.52
PRPF40B-206ENST00000547764 RAXQ9Y2V3 346 aa18.32■□□□□ 0.52
PRPF40B-206ENST00000547764 FAM237BA0A1B0GVD1 139 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 MAGEB16A2A368 324 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 SRRM3A6NNA2 597 aaPredicted RBP18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 UBXN7O94888 489 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 FTH1P02794 183 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 OR56A5P0C7T3 313 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 THRAP10827 490 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 HGFP14210 728 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 RBMS1P29558 406 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 ARCN1P48444 511 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 TTPAP49638 278 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 C16orf72Q14CZ0 275 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 TBC1D25Q3MII6 688 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 IZUMO3Q5VZ72 239 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 KIAA0930Q6ICG6 404 aaPredicted RBP18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 DUS1LQ6P1R4 473 aaKnown RBP18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 IGF2-ASQ6U949 168 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 PCGF5Q86SE9 256 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 SIGLEC10Q96LC7 697 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 CMKLR1Q99788 373 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 ASCL3Q9NQ33 180 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 OGFRQ9NZT2 677 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 PDP2Q9P2J9 529 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 LOXL2Q9Y4K0 774 aa18.31■□□□□ 0.52
PRPF40B-206ENST00000547764 URB1O60287 2271 aaKnown RBP18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 GOLGA8KD6RF30 607 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 GOLGA8TH3BQL2 631 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TTI1O43156 1089 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TLX3O43711 291 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TNFSF15O95150 251 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TYRP1P17643 537 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 AMD1P17707 334 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 PDHA2P29803 388 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 PREPP48147 710 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TRA2AQ13595 282 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 ANKRD20A4Q4UJ75 823 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TMEM135Q86UB9 458 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 HOOK3Q86VS8 718 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 ELMO1Q92556 727 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 FGF11Q92914 225 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TMEM159Q96B96 161 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 ZNF578Q96N58 590 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 FCRL3Q96P31 734 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 KRT12Q99456 494 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 TRIM51Q9BSJ1 452 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 OR52A5Q9H2C5 316 aa18.3■□□□□ 0.52
PRPF40B-206ENST00000547764 LIN7AO14910 233 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 HGSO14964 777 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 JMJD7P0C870 316 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 PAMP19021 973 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 ERVPABLB-1P60509 514 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 RPA4Q13156 261 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 DHX34Q14147 1143 aaKnown RBP18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 SNAP47Q5SQN1 464 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 MRNIPQ6NTE8 343 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 ZNF449Q6P9G9 518 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 NAPRTQ6XQN6 538 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 OTUD6BQ8N6M0 293 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 JPH3Q8WXH2 748 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 ZNF669Q96BR6 464 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 PISDQ9UG56 409 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 MAD1L1Q9Y6D9 718 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 RPS6KL1Q9Y6S9 549 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 CELSR3Q9NYQ7 3312 aa18.29■□□□□ 0.52
PRPF40B-206ENST00000547764 ANKRD11Q6UB99 2663 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 ZCWPW2A0A1B0GU75 182 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 A8MU76 341 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 CDRT15L2A8MXV6 281 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 F8W8V4 182 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 PRMT5O14744 637 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 NDUFS3O75489 264 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 ITGA2BP08514 1039 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 ITGB6P18564 788 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 ITIH1P19827 911 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 MLLT3P42568 568 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 CD151P48509 253 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 GFERP55789 205 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 BRD3Q15059 726 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 SDCCAG8Q86SQ7 713 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 PLXDC1Q8IUK5 500 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 SPATA4Q8NEY3 305 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 SNIP1Q8TAD8 396 aaKnown RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 ZFPM2Q8WW38 1151 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 RSC1A1Q92681 617 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 C16orf45Q96MC5 204 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 P2RY12Q9H244 342 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 THSD1Q9NS62 852 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 IL1RAPL1Q9NZN1 696 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 AKAP7Q9P0M2 348 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 KLHL3Q9UH77 587 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 HEBP2Q9Y5Z4 205 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 COLEC10Q9Y6Z7 277 aa18.28■□□□□ 0.52
PRPF40B-206ENST00000547764 MN1Q10571 1320 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 SLC5A10A0PJK1 596 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 IQCF5A8MTL0 148 aa18.27■□□□□ 0.52
PRPF40B-206ENST00000547764 IFRD1O00458 451 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms