RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CEBPBP17676 345 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 GPX3P22352 226 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 FOLH1Q04609 750 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 ACBD5Q5T8D3 534 aaPredicted RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 HTR3DQ70Z44 454 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 DHFR2Q86XF0 187 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 NXPE1Q8N323 547 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 FATE1Q969F0 183 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 MAELQ96JY0 434 aaKnown RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 AP4S1Q9Y587 144 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 TMEM202A6NGA9 273 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 E2F3O00716 465 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 GAPDHSO14556 408 aaPredicted RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 PTPN2P17706 415 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 RPL10P27635 214 aaKnown RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 HALP42357 657 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 MTA1Q13330 715 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 BLMHQ13867 455 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 TRIM25Q14258 630 aaKnown RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 ARHGAP15Q53QZ3 475 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 CARD16Q5EG05 197 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 C6orf136Q5SQH8 315 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 DOK6Q6PKX4 331 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 SBSNQ6UWP8 590 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 UBE2R2Q712K3 238 aaPredicted RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 KRTCAP2Q8N6L1 136 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 MRPL43Q8N983 215 aaKnown RBP12.51□□□□□ -0.41
SCAF11-209ENST00000547018 PHC3Q8NDX5 983 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 RHEBL1Q8TAI7 183 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 MAP10Q9P2G4 905 aa12.51□□□□□ -0.41
SCAF11-209ENST00000547018 NME4O00746 187 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 FZD6O60353 706 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 DGKAP23743 735 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 NFKBIAP25963 317 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 PPP3CCP48454 512 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SATB1Q01826 763 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 LRP8Q14114 963 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SFRP1Q8N474 314 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 CPSF7Q8N684 471 aaKnown RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 AURKBQ96GD4 344 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 LRRC3BQ96PB8 259 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 THUMPD3Q9BV44 507 aaKnown RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SPHK2Q9NRA0 654 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 PLXNA3P51805 1871 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SLC22A3O75751 556 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 WDR47O94967 919 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ETS2P15036 469 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 VCLP18206 1134 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ACRV1P26436 265 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 PRDX6P30041 224 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 CCR7P32248 378 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 CASP9P55211 416 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 HSD11B1LQ7Z5J1 315 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ADAMTSL2Q86TH1 951 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 STK40Q8N2I9 435 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 JADE3Q92613 823 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 VCXQ9H320 206 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ZNF385DQ9H6B1 395 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 IL23AQ9NPF7 189 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ZNF490Q9ULM2 529 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 PSMD13Q9UNM6 376 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SLC22A14Q9Y267 594 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 TRIOBPQ9H2D6 2365 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 RNF103-CHMP3A0A140T963 221 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SMNDC1O75940 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 WISP3O95389 354 aaPredicted RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 CA3P07451 260 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ATP6V1B2P21281 511 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 GJA8P48165 433 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 KANK2Q63ZY3 851 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 TPRG1Q6ZUI0 275 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 SMG7Q92540 1137 aaKnown RBP12.5□□□□□ -0.41
SCAF11-209ENST00000547018 GBP5Q96PP8 586 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 MYOCQ99972 504 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 ACAT2Q9BWD1 397 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 EBPLQ9BY08 206 aa12.5□□□□□ -0.41
SCAF11-209ENST00000547018 RFXAPO00287 272 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 POP4O95707 220 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 MLYCDO95822 493 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 CLIC3O95833 236 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 LYNP07948 512 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 RPS17P08708 135 aaKnown RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 HIST1H2AGP0C0S8 130 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 UROSP10746 265 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 HIST1H2ADP20671 130 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 SLC6A11P48066 632 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 PLOD1Q02809 727 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 CYP51A1Q16850 503 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 PGS1Q32NB8 556 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 TBCELQ5QJ74 424 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 OTUD3Q5T2D3 398 aaPredicted RBP12.49□□□□□ -0.41
SCAF11-209ENST00000547018 GRAMD4Q6IC98 578 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 Q6ZSR9 355 aa12.49□□□□□ -0.41
SCAF11-209ENST00000547018 HIST1H2AHQ96KK5 128 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms