RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CDK5RAP1Q96SZ6 601 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ZBTB18Q99592 522 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NACA2Q9H009 215 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 PAIP1Q9H074 479 aaKnown RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 AP5M1Q9H0R1 490 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ING2Q9H160 280 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 RAD21L1Q9H4I0 556 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 CCNB1IP1Q9NPC3 277 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NECTIN3Q9NQS3 549 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 FAM105AQ9NUU6 356 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NLE1Q9NVX2 485 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 POLR3BQ9NW08 1133 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 NUDT4Q9NZJ9 180 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 IFT80Q9P2H3 777 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-225ENST00000545920 DNAJB9Q9UBS3 223 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 C3orf18Q9UK00 162 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 CYP8B1Q9UNU6 501 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ERGIC3Q9Y282 383 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF711Q9Y462 761 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ORC6Q9Y5N6 252 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 TRPV2Q9Y5S1 764 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 SNX5Q9Y5X3 404 aa6.39□□□□□ -1.39
SNHG1-225ENST00000545920 ISPDA4D126 451 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM221A6NGB7 291 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CLDN25C9JDP6 229 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM189-UBE2V1I3L0A0 370 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 M0QX08 132 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 SLC16A6O15403 523 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 DPM1O60762 260 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 RAMP2O60895 175 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 VPS26AO75436 327 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 SULT1C4O75897 302 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 RECQL5O94762 991 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 RHOBTB1O94844 696 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ALPLP05186 524 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 UGT2B4P06133 528 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 MMP2P08253 660 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 SERPINF2P08697 491 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ATXN1LP0C7T5 689 aaKnown RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 OCM2P0CE71 109 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 OCMP0CE72 109 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ITGAMP11215 1152 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CD1EP15812 388 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 FGFR3P22607 806 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 TPP2P29144 1249 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CD86P42081 329 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PIK3CGP48736 1102 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 TTPAP49638 278 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 BCAP31P51572 246 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 SLC5A3P53794 718 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CDKN2DP55273 166 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 FKBP1BP68106 108 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 RELAQ04206 551 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CBX3Q13185 183 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PMS2P3Q13401 168 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 KRR1Q13601 381 aaKnown RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PCBP2Q15366 365 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 TAF1AQ15573 450 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PFKFB4Q16877 469 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 C5orf22Q49AR2 442 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ATP6AP1LQ52LC2 224 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 SIRPB2Q5JXA9 342 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CDKL4Q5MAI5 379 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ARTNQ5T4W7 220 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CLEC6AQ6EIG7 209 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 GTF2IRD2BQ6EKJ0 949 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ANKRD26P1Q6NSI1 321 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 NANOGP8Q6NSW7 305 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 TUBA3EQ6PEY2 450 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ELMSAN1Q6PJG2 1045 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 GPRIN3Q6ZVF9 776 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 GPR142Q7Z601 462 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ADAMTSL2Q86TH1 951 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 GTF2IRD2Q86UP8 949 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ANKRD13BQ86YJ7 626 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 HIPK1Q86Z02 1210 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 SPATA2LQ8IUW3 424 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF683Q8IZ20 524 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 EID3Q8N140 333 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ITFG1Q8TB96 612 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ARRDC2Q8TBH0 407 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ANKRD49Q8WVL7 239 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 DNAJB3Q8WWF6 145 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 KCNJ9Q92806 393 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 ACDQ96AP0 544 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PTERQ96BW5 349 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 BIRC7Q96CA5 298 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CDCA5Q96FF9 252 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 MAGEB10Q96LZ2 347 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 C3orf30Q96M34 536 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CCDC138Q96M89 665 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 DEPDC7Q96QD5 511 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PARK7Q99497 189 aaKnown RBP6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CGREF1Q99674 301 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 PSD2Q9BQI7 771 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 CHID1Q9BWS9 393 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.38□□□□□ -1.393e-6■■□□□ 14.4
SNHG1-225ENST00000545920 SIK2Q9H0K1 926 aa6.38□□□□□ -1.39
SNHG1-225ENST00000545920 MUC3BQ9H195 1237 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms