RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	CDK19	Q9BWU1	502 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	FAM234A	Q9H0X4	552 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	TASP1	Q9H6P5	420 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	ANKZF1	Q9H8Y5	726 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	TRMT1	Q9NXH9	659 aa	Known RBP	4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	OR6C3	Q9NZP0	311 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	STK39	Q9UEW8	545 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	SQOR	Q9Y6N5	450 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	TULP4	Q9NRJ4	1543 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	USP6	P35125	1406 aa		4.04	□□□□□ -1.76
SNHG1-222	ENST00000545308	PCNT	O95613	3336 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	GAGE12J	A6NER3	117 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TRIM64	A6NGJ6	449 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TRIM64B	A6NI03	449 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	OR6C76	A6NM76	312 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	EIF4E1B	A6NMX2	242 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308		E5RJQ4	531 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308		H0YAE9	185 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	WNT9B	O14905	357 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TIMM23	O14925	209 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	HSPA12A	O43301	675 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SYNCRIP	O60506	623 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	GOSR1	O95249	250 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	NR2F2	P24468	414 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	MATR3	P43243	847 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ME1	P48163	572 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ST3GAL1	Q11201	340 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	PPIG	Q13427	754 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TUBB2A	Q13885	445 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	CTTN	Q14247	550 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	KRT33B	Q14525	404 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SLMAP	Q14BN4	828 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ODF3L2	Q3SX64	289 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	LEXM	Q3ZCV2	418 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SUPT20HL1	Q3ZLR7	823 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZRANB3	Q5FWF4	1079 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308		Q5PR19	223 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZNF626	Q68DY1	528 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	DUS1L	Q6P1R4	473 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	PPP1R21	Q6ZMI0	780 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308		Q6ZSV7	163 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SHF	Q7M4L6	423 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ATG9A	Q7Z3C6	839 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	CNGA4	Q8IV77	575 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	CCDC170	Q8IYT3	715 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	CCAR2	Q8N163	923 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	NAT8L	Q8N9F0	302 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	KCNE4	Q8WWG9	221 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ADAMTS14	Q8WXS8	1223 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	RND1	Q92730	232 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	ZBTB9	Q96C00	473 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	NXNL1	Q96CM4	212 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SPACA9	Q96E40	222 aa	Predicted RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SPAG5	Q96R06	1193 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	SH3GL2	Q99962	352 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	MGME1	Q9BQP7	344 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TUBB2B	Q9BVA1	445 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	MRPL9	Q9BYD2	267 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	RETREG1	Q9H6L5	497 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	NOL11	Q9H8H0	719 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	CNGB3	Q9NQW8	809 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	COQ3	Q9NZJ6	369 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	DDX25	Q9UHL0	483 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	DBNL	Q9UJU6	430 aa	Known RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TINAG	Q9UJW2	476 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	CDC14A	Q9UNH5	594 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	B3GALT5	Q9Y2C3	310 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	COL5A2	P05997	1499 aa	Predicted RBP	4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	PIK3C2G	O75747	1445 aa		4.03	□□□□□ -1.76
SNHG1-222	ENST00000545308	BTAF1	O14981	1849 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	RGPD5	Q99666	1765 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308		A0A0U1RQK1	487 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	FEZF1	A0PJY2	475 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	ARHGEF37	A1IGU5	675 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	ZNF320	A2RRD8	509 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308		A4D1N5	150 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308		H0YIN7	160 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	CCDC188	H7C350	402 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	PSMD14	O00487	310 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	WDR46	O15213	610 aa	Known RBP	4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	ZIC3	O60481	467 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	FMO6P	O60774	539 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	ZNF217	O75362	1048 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	OR52Z1	P0C646	297 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	LINGO3	P0C6S8	592 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	VPREB1	P12018	145 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	ATP6V1B1	P15313	513 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	PFKFB1	P16118	471 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	GJA1	P17302	382 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	HOXB6	P17509	224 aa	Known RBP	4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	DDX5	P17844	614 aa	Known RBP	4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	HRH2	P25021	359 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	CERS1	P27544	350 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	TCF7	P36402	384 aa	Predicted RBP	4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	PRKCI	P41743	596 aa		4.02	□□□□□ -1.77
SNHG1-222	ENST00000545308	RFX5	P48382	616 aa	Predicted RBP	4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms