RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 PPM1DO15297 605 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 B4GAT1O43505 415 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 LDB2O43679 373 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 KIF5CO60282 957 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 CPNE6O95741 557 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 MPOP05164 745 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TPH1P17752 444 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 ITGALP20701 1170 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 IDSP22304 550 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 RBMS1P29558 406 aaKnown RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 AKT1P31749 480 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 CXCR5P32302 372 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 INHBCP55103 352 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 OR1D5P58170 312 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 GABREP78334 506 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TMPRSS15P98073 1019 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 B4GALNT1Q00973 533 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 HHEXQ03014 270 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 EIF3IQ13347 325 aaKnown RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 MSLNQ13421 630 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 NFATC2Q13469 925 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SEPT6Q14141 434 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 PTPRCAPQ14761 206 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 NR1D2Q14995 579 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SKIDA1Q1XH10 827 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 PLA2G4EQ3MJ16 856 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 MAP9Q49MG5 647 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 GPR33Q49SQ1 333 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 C3orf38Q5JPI3 329 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 GPRC6AQ5T6X5 926 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 IYDQ6PHW0 289 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TMEM220Q6QAJ8 160 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 C8orf86Q6ZUL3 223 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SNX20Q7Z614 316 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SFTPA2Q8IWL1 248 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 REXO1L1PQ8IX06 675 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 DMRTC2Q8IXT2 367 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SFRP1Q8N474 314 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TAB3Q8N5C8 712 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 GOLM1Q8NBJ4 401 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 DDHD1Q8NEL9 900 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 OR13C4Q8NGS5 318 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 WDR36Q8NI36 951 aaKnown RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SLC37A2Q8TED4 501 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 STYXQ8WUJ0 223 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 FGF11Q92914 225 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TMEM159Q96B96 161 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 DCUN1D1Q96GG9 259 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 ATXN7L3BQ96GX2 97 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 LIN37Q96GY3 246 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 AHCYL2Q96HN2 611 aaKnown RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF578Q96N58 590 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SARS2Q9NP81 518 aaKnown RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 NLE1Q9NVX2 485 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 AKAP7Q9P0M2 348 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TBC1D29Q9UFV1 150 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 CRLS1Q9UJA2 301 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 TMPRSS11EQ9UL52 423 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 SATB2Q9UPW6 733 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 DNAJC16Q9Y2G8 782 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 KCTD3Q9Y597 815 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 PCYT1BQ9Y5K3 369 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 CHD8Q9HCK8 2581 aa7.25□□□□□ -1.25
CPSF7-224ENST00000544990 COL27A1Q8IZC6 1860 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-224ENST00000544990 KIF26BQ2KJY2 2108 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 HEATR9A2RTY3 570 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 OR2AG2A6NM03 316 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 AGAP14A8MT82 685 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 PDZK1P1A8MUH7 402 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 H7C0S8 307 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 TAF4O00268 1085 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 GAPDHSO14556 408 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 RRP8O43159 456 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 BRINP1O60477 761 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 POP7O75817 140 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 SUN1O94901 812 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 BPNT1O95861 308 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 VIPP01282 170 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 APRTP07741 180 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 ETS1P14921 441 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 XRCC1P18887 633 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 CCKBRP32239 447 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 MC4RP32245 332 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 RPL22P35268 128 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 HALP42357 657 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF140P52738 457 aaPredicted RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 ERVPABLB-1P60509 514 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 BASP1P80723 227 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 XIAPP98170 497 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 SQSTM1Q13501 440 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 SEMA5AQ13591 1074 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 POU6F1Q14863 301 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 POU4F3Q15319 338 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 TBC1D25Q3MII6 688 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 AMZ1Q400G9 498 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 KHDC1Q4VXA5 237 aaKnown RBP7.24□□□□□ -1.25
CPSF7-224ENST00000544990 ZRANB3Q5FWF4 1079 aa7.24□□□□□ -1.25
CPSF7-224ENST00000544990 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms