RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 DNAAF5Q86Y56 855 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CEP57L1Q8IYX8 460 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 SFRP1Q8N474 314 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ZADH2Q8N4Q0 377 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ARFGAP1Q8N6T3 406 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 PLA2G15Q8NCC3 412 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 KIAA0895Q8NCT3 520 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ITLN2Q8WWU7 325 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 PATE1Q8WXA2 126 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 CCDC47Q96A33 483 aaKnown RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 C9orf72Q96LT7 481 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 FER1L6-AS2Q96M78 137 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ZNF641Q96N77 438 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 IP6K3Q96PC2 410 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 HERPUD2Q9BSE4 406 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 RNF32Q9H0A6 362 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MAGEH1Q9H213 219 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 BLZF1Q9H2G9 400 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 SUDS3Q9H7L9 328 aaPredicted RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MCCC2Q9HCC0 563 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 MPP6Q9NZW5 540 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 SUFUQ9UMX1 484 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 SNX7Q9UNH6 387 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 FARSAQ9Y285 508 aaKnown RBP4.03□□□□□ -1.76
SNHG1-220ENST00000544550 COQ4Q9Y3A0 265 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 ZFHX3Q15911 3703 aa4.03□□□□□ -1.76
SNHG1-220ENST00000544550 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CACNA1DQ01668 2161 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KIR2DS5A0A0G2JLQ3 304 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 A0A0G2JNG1 304 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 A0A1W2PQJ5 194 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 LILRA5A6NI73 299 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 A6NL46 340 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 OR5K4A6NMS3 321 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 F5H423 210 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KIR2DS3K7RE56 304 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 E2F3O00716 465 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 POLR2DO15514 142 aaKnown RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 BUB1BO60566 1050 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 MAFKO60675 156 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 RAMP2O60895 175 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 SRGAP2O75044 1071 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 DAB1O75553 588 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 RASSF9O75901 435 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 TMCC1O94876 653 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 FKBP9O95302 570 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CD160O95971 181 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 C9P02748 559 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KLK3P07288 261 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 C8BP07358 591 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 RAB40ALP0C0E4 278 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KRT15P19012 456 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 AGAP20933 346 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 TEAD1P28347 426 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 SERPINA4P29622 427 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ADCY8P40145 1251 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 MAPK9P45984 424 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ARCN1P48444 511 aaKnown RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CXCR3P49682 368 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 GSDMDP57764 484 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 IL2P60568 153 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 POLR2LP62875 67 aaKnown RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CDK3Q00526 305 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ACY1Q03154 408 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 DEUP1Q05D60 604 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PDCLQ13371 301 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 NFATC2Q13469 925 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 IL10RAQ13651 578 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KIR2DS5Q14953 304 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 STK38Q15208 465 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ASIC2Q16515 512 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KYNUQ16719 465 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CBWD6Q4V339 395 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 INO80DQ53TQ3 878 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 DCAF17Q5H9S7 520 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 FIGNQ5HY92 759 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CBWD3Q5JTY5 395 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CBWD5Q5RIA9 395 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ATXN7L2Q5T6C5 722 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 TCERG1LQ5VWI1 586 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 B3GNTL1Q67FW5 361 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 XKRXQ6PP77 449 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PAQR3Q6TCH7 311 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 Q6ZS92 163 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 C11orf57Q6ZUT1 292 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 FKBP9P1Q75LS8 142 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PRSS42Q7Z5A4 293 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 MRGPRGQ86SM5 289 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF761Q86XN6 746 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 RAB43Q86YS6 212 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 TGIF2LYQ8IUE0 185 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ZDHHC17Q8IUH5 632 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 DRC7Q8IY82 874 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF683Q8IZ20 524 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CBARPQ8N350 705 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PAF1Q8N7H5 531 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 CLEC1AQ8NC01 280 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 ABHD4Q8TB40 342 aa4.02□□□□□ -1.77
SNHG1-220ENST00000544550 PHOSPHO1Q8TCT1 267 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms