RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 RHOQP17081 205 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 HTR7P34969 479 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 UBE2R2Q712K3 238 aaPredicted RBP19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CXXC5Q7LFL8 322 aaKnown RBP19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CHST15Q7LFX5 561 aaPredicted RBP19.11■□□□□ 0.65
SUDS3-204ENST00000543473 C11orf65Q8NCR3 313 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 FBXO27Q8NI29 283 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CAPNS2Q96L46 248 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 TMEM209Q96SK2 561 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 FZD8Q9H461 694 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 MYH7BA7E2Y1 1941 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 YJEFN3A6XGL0 299 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 FADS2P1A8MWK0 482 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 SCAMP3O14828 347 aaKnown RBP19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CLDN9O95484 217 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 BRCC3P46736 316 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 ALDH3A2P51648 485 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 PFKPQ01813 784 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.11■□□□□ 0.65
SUDS3-204ENST00000543473 OR52L1Q8NGH7 329 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 PPCDCQ96CD2 204 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 BIRC8Q96P09 236 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 TSPAN18Q96SJ8 248 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CGREF1Q99674 301 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 TCF25Q9BQ70 676 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 ENTPD4Q9Y227 616 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 TSPAN1O60635 241 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 PGRP06401 933 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 MAPK8P45983 427 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 ZNF423Q2M1K9 1284 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CPNE9Q8IYJ1 553 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 UROC1Q96N76 676 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 PEBP4Q96S96 227 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 NKIRAS2Q9NYR9 191 aa19.11■□□□□ 0.65
SUDS3-204ENST00000543473 CYP2A6P11509 494 aaPredicted RBP19.1■□□□□ 0.65
SUDS3-204ENST00000543473 FOXM1Q08050 763 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 OLIG2Q13516 323 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 RABL3Q5HYI8 236 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 TRAPPC5Q8IUR0 188 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 EEF1AKMT1Q8WVE0 214 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 USP7Q93009 1102 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 TFB2MQ9H5Q4 396 aaKnown RBP19.1■□□□□ 0.65
SUDS3-204ENST00000543473 TMEM138Q9NPI0 162 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 A0A1W2PQ72 361 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 GM2AP17900 193 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 ITIH1P19827 911 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 NTSP30990 170 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 TNFAIP8L3Q5GJ75 292 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 TMEM192Q8IY95 271 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 CFAP52Q8N1V2 620 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 ZNF607Q96SK3 696 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 PHF24Q9UPV7 400 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 ITPKAP23677 461 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 CDH12P55289 794 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 MVKQ03426 396 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 ACOX1Q15067 660 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 KCNA10Q16322 511 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 MEP1AQ16819 746 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 PARP15Q460N3 678 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 CD99L2Q8TCZ2 262 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 BIRC7Q96CA5 298 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 BTN2A3PQ96KV6 586 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 ZNF224Q9NZL3 707 aa19.1■□□□□ 0.65
SUDS3-204ENST00000543473 TNNI3P19429 210 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 ABRQ12979 859 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 TPRG1LQ5T0D9 272 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 RASSF5Q8WWW0 418 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 ZUFSPQ96AP4 578 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 C11orf24Q96F05 449 aaPredicted RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 LPIN3Q9BQK8 851 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 MED28Q9H204 178 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 ATP13A3Q9H7F0 1226 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 PRDM8Q9NQV8 689 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 CFL2Q9Y281 166 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 SLC30A4O14863 429 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 POU2F1P14859 743 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 PSMA3P25788 255 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 TMBIM6P55061 237 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 HKDC1Q2TB90 917 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 HECTD3Q5T447 861 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 FBRSL1Q9HCM7 1045 aaKnown RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 A0A1W2PQH9 124 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 FABP12A6NFH5 140 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 RFTN1Q14699 578 aaPredicted RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 CYP20A1Q6UW02 462 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 CLP1Q92989 425 aaKnown RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 TXNRD2Q9NNW7 524 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 SNTG1Q9NSN8 517 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 LOC100130705A0A1B0GUX0 176 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 A0A1W2PP18 115 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 TLR5O60602 858 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 CLCN2P51788 898 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 PSMD4P55036 377 aaKnown RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 YBEYP58557 167 aaPredicted RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 SYPL2Q5VXT5 272 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 DOK6Q6PKX4 331 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 IRGQQ8WZA9 623 aa19.09■□□□□ 0.65
SUDS3-204ENST00000543473 RPF2Q9H7B2 306 aaKnown RBP19.09■□□□□ 0.65
SUDS3-204ENST00000543473 K7EPI3 171 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 GABRDO14764 452 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms