RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 SLC5A10A0PJK1 596 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 NPEPPSL1A6NEC2 478 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TK2O00142 265 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TNFRSF10AO00220 468 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 GPC4O75487 556 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 SLCO2B1O94956 709 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 FUCA1P04066 466 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 ACP5P13686 325 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 CPA3P15088 417 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 CD38P28907 300 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 ETV4P43268 484 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 PREPP48147 710 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 WDR4P57081 412 aaKnown RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 SRP54P61011 504 aaKnown RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 IL9RQ01113 521 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 PLOD1Q02809 727 aaPredicted RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 OVGP1Q12889 678 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 SRSF5Q13243 272 aaKnown RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 TSNQ15631 228 aaKnown RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 ALG11Q2TAA5 492 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 ZNF658BQ4V348 819 aaPredicted RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 PYCR3Q53H96 274 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TECRLQ5HYJ1 363 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 NEK10Q6ZWH5 1172 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 CHST15Q7LFX5 561 aaPredicted RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 RD3Q7Z3Z2 195 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 ISCA2Q86U28 154 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 IQCHQ86VS3 1027 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 VRK3Q8IV63 474 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 OXR1Q8N573 874 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 LILRA3Q8N6C8 439 aaPredicted RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 STAG3L4Q8TBR4 150 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 RDH11Q8TC12 318 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 DNASE2BQ8WZ79 361 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TSACCQ96A04 125 aaPredicted RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 KIAA1191Q96A73 305 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 PTERQ96BW5 349 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 PDXPQ96GD0 296 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 OR2M4Q96R27 311 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TIMM29Q9BSF4 260 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 COG4Q9H9E3 785 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TM9SF3Q9HD45 589 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 TM7SF3Q9NS93 570 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 CPSF2Q9P2I0 782 aaKnown RBP10.47□□□□□ -0.73
DDB1-221ENST00000543162 XPR1Q9UBH6 696 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 SLC23A2Q9UGH3 650 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 CDYLQ9Y232 598 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 DNAJC16Q9Y2G8 782 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 GPSM3Q9Y4H4 160 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 GON4LQ3T8J9 2241 aa10.47□□□□□ -0.73
DDB1-221ENST00000543162 THADAQ6YHU6 1953 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 SPTY2D1-AS1A0A0U1RR47 76 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 A0A1W2PR77 199 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 CCDC189A1A4V9 331 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 FAM86C2PA6NEL3 165 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 H3BM21 787 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 CDC7O00311 574 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 HRO43593 1189 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 GPR37L1O60883 481 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 KCNJ13O60928 360 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 KERAO60938 352 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 DHRS4L1P0CG22 281 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 SP9P0CG40 484 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 MPC1LP0DKB6 136 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 MYL2P10916 166 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 NEFHP12036 1026 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 TAC1P20366 129 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 CNR2P34972 360 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 MDH1P40925 334 aaKnown RBP10.46□□□□□ -0.73
DDB1-221ENST00000543162 SERPINB4P48594 390 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 DHPSP49366 369 aaPredicted RBP10.46□□□□□ -0.73
DDB1-221ENST00000543162 GUCY1A3Q02108 690 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 RPA4Q13156 261 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 FZD2Q14332 565 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 NFE2L1Q14494 772 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 OR4D1Q15615 310 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 ZNF528Q3MIS6 628 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 LYSMD4Q5XG99 296 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 PMS2CLQ68D20 193 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 CYHR1Q6ZMK1 362 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 FAM83HQ6ZRV2 1179 aaPredicted RBP10.46□□□□□ -0.73
DDB1-221ENST00000543162 CEP68Q76N32 757 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 ADAMTSL2Q86TH1 951 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 GPSM1Q86YR5 675 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 HID1Q8IV36 788 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 SLC22A15Q8IZD6 547 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 SLC22A18ASQ8N1D0 253 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 C1orf216Q8TAB5 229 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 RHEBL1Q8TAI7 183 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 NELL1Q92832 810 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 OSGEPL1Q9H4B0 414 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 GPR27Q9NS67 375 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 KLC4Q9NSK0 619 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 ZSCAN32Q9NX65 697 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 COPG2Q9UBF2 871 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 GULP1Q9UBP9 304 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 IKZF3Q9UKT9 509 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 RNF112Q9ULX5 631 aa10.46□□□□□ -0.73
DDB1-221ENST00000543162 WDR91A4D1P6 747 aa10.45□□□□□ -0.74
DDB1-221ENST00000543162 SYCE1LA8MT33 242 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms