RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 RBM4Q9BWF3 364 aaKnown RBP12.74□□□□□ -0.37
DDX11-223ENST00000542838 GORASP2Q9H8Y8 452 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 ACTR8Q9H981 624 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 SARS2Q9NP81 518 aaKnown RBP12.74□□□□□ -0.37
DDX11-223ENST00000542838 FLRT1Q9NZU1 646 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 FNDC3AQ9Y2H6 1198 aaKnown RBP12.74□□□□□ -0.37
DDX11-223ENST00000542838 KRBA1A5PL33 1030 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 HS6ST1O60243 411 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 OR1I1O60431 355 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 TSPAN12O95859 305 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 IL2P60568 153 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 PPP2R2BQ00005 443 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 AP5B1Q2VPB7 878 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 MRPL10Q7Z7H8 261 aaKnown RBP12.74□□□□□ -0.37
DDX11-223ENST00000542838 SVOPLQ8N434 492 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 OR8J3Q8NGG0 315 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 FAM162AQ96A26 154 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 ABHD8Q96I13 439 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 MS4A4AQ96JQ5 239 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 ALPK1Q96QP1 1244 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 NODALQ96S42 347 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 EXD2Q9NVH0 621 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.74□□□□□ -0.37
DDX11-223ENST00000542838 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
DDX11-223ENST00000542838 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
DDX11-223ENST00000542838 DOCK3Q8IZD9 2030 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 LOC100130705A0A1B0GUX0 176 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 SLC1A7O00341 560 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 IFRD1O00458 451 aaPredicted RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 NDUFS2O75306 463 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 KATNA1O75449 491 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 HOXC8P31273 242 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 EIF2B2P49770 351 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 BTG3Q14201 252 aaPredicted RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 ANKRD13BQ86YJ7 626 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 MDGA1Q8NFP4 955 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 PJA1Q8NG27 643 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 BRI3BPQ8WY22 251 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 SUSD3Q96L08 255 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TRIB3Q96RU7 358 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 MAGEE1Q9HCI5 957 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 ATAD3AQ9NVI7 634 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 USE1Q9NZ43 259 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 NEUROG3Q9Y4Z2 214 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TRIM17Q9Y577 477 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TOR1BO14657 336 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 LSM1O15116 133 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 CHRNA1P02708 482 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 CNPP09543 421 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 PRKACGP22612 351 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 GP2P55259 537 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 YBEYP58557 167 aaPredicted RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 CD300CQ08708 224 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TUSC3Q13454 348 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 OXA1LQ15070 435 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 C18orf21Q32NC0 220 aaPredicted RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 RFTN2Q52LD8 501 aaPredicted RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 LAIR2Q6ISS4 152 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 PSAPL1Q6NUJ1 521 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 SLCO6A1Q86UG4 719 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TTC16Q8NEE8 873 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 CCDC115Q96NT0 180 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 SMIM14Q96QK8 99 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TBCDQ9BTW9 1192 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 MROQ9BYG7 248 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 WDR12Q9GZL7 423 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 MTRRQ9UBK8 725 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TMEM247A6NEH6 219 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 DRGXA6NNA5 263 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 ANKRD28O15084 1053 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 MAN1A2O60476 641 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 UGT2B11O75310 529 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 ITIH1P19827 911 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 HPCAL1P37235 193 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 TMED10P49755 219 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 OXCT1P55809 520 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 CYP4F3Q08477 520 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 CTF1Q16619 201 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 PIANPQ8IYJ0 282 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 ZNF548Q8NEK5 533 aaPredicted RBP12.73□□□□□ -0.37
DDX11-223ENST00000542838 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 CD200R1Q8TD46 325 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 GPR152Q8TDT2 470 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 MYEOVQ96EZ4 313 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 C3orf18Q9UK00 162 aa12.73□□□□□ -0.37
DDX11-223ENST00000542838 C2orf81A6NN90 581 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 ZNF99A8MXY4 864 aaPredicted RBP12.72□□□□□ -0.37
DDX11-223ENST00000542838 E5RI56 91 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 AXIN1O15169 862 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 GPR182O15218 404 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 MGEA5O60502 916 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 E2F6O75461 281 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 PRKD3O94806 890 aa12.72□□□□□ -0.37
DDX11-223ENST00000542838 ALDH2P05091 517 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms