RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 HEXBP07686 556 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 TPM2P07951 284 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CYC1P08574 325 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CHRM5P08912 532 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ALPPL2P10696 532 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 EPORP19235 508 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CD58P19256 250 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ITGB8P26012 769 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CD27P26842 260 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 PTGS2P35354 604 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 IL15P40933 162 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 WNT5AP41221 380 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RABIFP47224 123 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 METAP2P50579 478 aaKnown RBP eCLIP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 TKTL1P51854 596 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 PTENP60484 403 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 PDK1Q15118 436 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RABEP1Q15276 862 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 UGCGQ16739 394 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CDO1Q16878 200 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CERKLQ49MI3 558 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ZNF789Q5FWF6 425 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 TTC39AQ5SRH9 613 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RNASEH2BQ5TBB1 312 aaKnown RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 GGNBP1Q5YKI7 109 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ANKRD54Q6NXT1 300 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 METTL2BQ6P1Q9 378 aaKnown RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CASC4Q6P4E1 433 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 FAM198BQ6UWH4 519 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 NHLRC1Q6VVB1 395 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RNF207Q6ZRF8 634 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 MTSS1LQ765P7 747 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 TRILQ7L0X0 811 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ADCK1Q86TW2 530 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 DDIASQ8IXT1 998 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 SPATA6LQ8N4H0 392 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 HORMAD2Q8N7B1 307 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CNNM3Q8NE01 707 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 AGBL3Q8NEM8 1001 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 NEK11Q8NG66 645 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 EXD1Q8NHP7 514 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CAGE1Q8TC20 777 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ATL1Q8WXF7 558 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ADAMTS14Q8WXS8 1223 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 HAS1Q92839 578 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 BCL2L2Q92843 193 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ERGIC1Q969X5 290 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 SYAP1Q96A49 352 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CENPTQ96BT3 561 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 REPS1Q96D71 796 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 BSCL2Q96G97 398 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 C5orf30Q96GV9 206 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 METTL2AQ96IZ6 378 aaKnown RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 MUS81Q96NY9 551 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 FAM111AQ96PZ2 611 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 SEPHS2Q99611 448 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 SH3GL2Q99962 352 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 MLST8Q9BVC4 326 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RAD21L1Q9H4I0 556 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 PPP1R3EQ9H7J1 279 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 MINDY3Q9H8M7 445 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 PNRC2Q9NPJ4 139 aaKnown RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RNF146Q9NTX7 359 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 TMEM51Q9NW97 253 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 COMMD8Q9NX08 183 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 LAMP3Q9UQV4 416 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RPH3AQ9Y2J0 694 aaPredicted RBP3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 ADGBQ8N7X0 1667 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CDC42BPBQ9Y5S2 1711 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 RTEL1-TNFRSF6BF6WH68 1400 aa3.87□□□□□ -1.79
SFSWAP-211ENST00000542813 CCDC18Q5T9S5 1454 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 XIRP1Q702N8 1843 aaKnown RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 DIP2AQ14689 1571 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC9B1P1A6NJY1 282 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 K7EPI3 171 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 PPP6CO00743 305 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 CLDN4O14493 209 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NDUFS4O43181 175 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 PLPP2O43688 288 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SELENOFO60613 162 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SMPD2O60906 423 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NOL3O60936 208 aaKnown RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 MED24O75448 989 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 JTBO76095 146 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NDUFB4O95168 129 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC16A8O95907 504 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 GH1P01241 217 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 MYZAPP0CAP1 466 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 HKR1P10072 659 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TCF4P15884 667 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 FERP16591 822 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 CCNA2P20248 432 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 MAOAP21397 527 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 GABRA5P31644 462 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 CAMLGP49069 296 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 ATXN3P54252 364 aaPredicted RBP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TMPRSS3P57727 454 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 TRA2AQ13595 282 aaKnown RBP eCLIP3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 NEDD9Q14511 834 aa3.86□□□□□ -1.79
SFSWAP-211ENST00000542813 SLC39A14Q15043 492 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms