RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 LINC00032P0C843 101 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 SPATA31D3P0C874 917 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 PABPC4LP0CB38 370 aaKnown RBP9.71□□□□□ -0.85
SS18-205ENST00000542420 SRCP12931 536 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 ZNF26P17031 533 aaPredicted RBP9.71□□□□□ -0.85
SS18-205ENST00000542420 BPIP17213 487 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 TSPAN8P19075 237 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 PRPH2P23942 346 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 GSTT1P30711 240 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 MAPK9P45984 424 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 ZFP36L2P47974 494 aaKnown RBP9.71□□□□□ -0.85
SS18-205ENST00000542420 ZXDBP98169 803 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 TRAF3Q13114 568 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 TLR1Q15399 786 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 SPATA31D4Q6ZUB0 917 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 LRRC70Q7Z2Q7 622 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 KIAA0907Q7Z7F0 614 aaPredicted RBP9.71□□□□□ -0.85
SS18-205ENST00000542420 CAMK1DQ8IU85 385 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 ALDH16A1Q8IZ83 802 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 PNPLA1Q8N8W4 532 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 MFSD2AQ8NA29 543 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 OR52E4Q8NGH9 312 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 OR9I1Q8NGQ6 314 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 ATP6V1E2Q96A05 226 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 TMEM125Q96AQ2 219 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 FAM83CQ9BQN1 747 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 CD244Q9BZW8 370 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 CIPCQ9C0C6 399 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 SUV39H2Q9H5I1 410 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 RMI1Q9H9A7 625 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 ASAH2Q9NR71 780 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 MARK1Q9P0L2 795 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.85
SS18-205ENST00000542420 EIF2B4Q9UI10 523 aaKnown RBP9.71□□□□□ -0.85
SS18-205ENST00000542420 ANKRD12Q6UB98 2062 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 CCDC154A6NI56 674 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 K7EPI3 171 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 PPP6CO00743 305 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 FGF18O76093 207 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 OR4F21O95013 312 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 CNPP09543 421 aaKnown RBP9.71□□□□□ -0.86
SS18-205ENST00000542420 IL10P22301 178 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 HNMTP50135 292 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 ATN1P54259 1190 aaPredicted RBP9.71□□□□□ -0.86
SS18-205ENST00000542420 ERVPABLB-1P60509 514 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 CARD16Q5EG05 197 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 PLEKHS1Q5SXH7 462 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 PPP4R4Q6NUP7 873 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 TRIM46Q7Z4K8 759 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 BBS7Q8IWZ6 715 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 OR8J3Q8NGG0 315 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 METTL6Q8TCB7 284 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 MIPOL1Q8TD10 442 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 TIFAQ96CG3 184 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 LRIG1Q96JA1 1093 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 KCNA7Q96RP8 456 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 MRPS26Q9BYN8 205 aaKnown RBP9.71□□□□□ -0.86
SS18-205ENST00000542420 SNX13Q9Y5W8 968 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 AP4B1Q9Y6B7 739 aa9.71□□□□□ -0.86
SS18-205ENST00000542420 OR7A17O14581 309 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 SMAD6O43541 496 aaKnown RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 NUAK1O60285 661 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 SYNCRIPO60506 623 aaKnown RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 SLC25A14O95258 325 aaPredicted RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 MT-CO1P00395 513 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 C8AP07357 584 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 OR56A5P0C7T3 313 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 CYP2A6P11509 494 aaPredicted RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 PSMA4P25789 261 aaKnown RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 HMOX2P30519 316 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 AGTR2P50052 363 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 DEFB103AP81534 67 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 NFYCQ13952 458 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 KCNC3Q14003 757 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 ARHGAP15Q53QZ3 475 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 BRAT1Q6PJG6 821 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 FAM151BQ6UXP7 276 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 Q6ZSR9 355 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 MSANTD1Q6ZTZ1 278 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 KREMEN2Q8NCW0 462 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 TNIP2Q8NFZ5 429 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 SLCO4A1Q96BD0 722 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 RHBDF1Q96CC6 855 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 YME1L1Q96TA2 773 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 LBHD1Q9BQE6 289 aaPredicted RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 NOL11Q9H8H0 719 aaKnown RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 CMTM6Q9NX76 183 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 OPTCQ9UBM4 332 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 MAGEL2Q9UJ55 1249 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 INTS6Q9UL03 887 aaKnown RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 BTRCQ9Y297 605 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 DENND4AQ7Z401 1863 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 LSM1O15116 133 aaKnown RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 ANXA5P08758 320 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 ALPIP09923 528 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 UBTFL6P0CB48 400 aaPredicted RBP9.7□□□□□ -0.86
SS18-205ENST00000542420 CTPS1P17812 591 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 WEE1P30291 646 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 CD70P32970 193 aa9.7□□□□□ -0.86
SS18-205ENST00000542420 CYP4F8P98187 520 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms