RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 COL26A1Q96A83 441 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 TRIM55Q9BYV6 548 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 TRIM5Q9C035 493 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 HRASLS2Q9NWW9 162 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 SLC24A2Q9UI40 661 aa19.39■□□□□ 0.69
DDX11-220ENST00000542244 DNMT3AQ9Y6K1 912 aaPredicted RBP19.39■□□□□ 0.69
DDX11-220ENST00000542244 MACROD2A1Z1Q3 448 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 KCNN4O15554 427 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 CREG1O75629 220 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 RBP3P10745 1247 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 PYGMP11217 842 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 ZNF140P52738 457 aaPredicted RBP19.38■□□□□ 0.69
DDX11-220ENST00000542244 EIF3EP60228 445 aaKnown RBP19.38■□□□□ 0.69
DDX11-220ENST00000542244 FOXK1P85037 733 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 MC1RQ01726 317 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 SRSF1Q07955 248 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■■■□ 20.8
DDX11-220ENST00000542244 LONRF2Q1L5Z9 754 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 DNTTIP2Q5QJE6 756 aaKnown RBP19.38■□□□□ 0.69
DDX11-220ENST00000542244 RAD9BQ6WBX8 426 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 CFAP206Q8IYR0 622 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 UBXN4Q92575 508 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 COL12A1Q99715 3063 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 OSBPL8Q9BZF1 889 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 ZCCHC2Q9C0B9 1178 aaKnown RBP19.38■□□□□ 0.69
DDX11-220ENST00000542244 TWSG1Q9GZX9 223 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 FGF21Q9NSA1 209 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 TLK1Q9UKI8 766 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 RARRES3Q9UL19 164 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 PADI1Q9ULC6 663 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 PLAAQ9Y263 795 aa19.38■□□□□ 0.69
DDX11-220ENST00000542244 FLNCQ14315 2725 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 PIPSLA2A3N6 862 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 AGAP14A8MT82 685 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 POLR2CP19387 275 aaPredicted RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 TNNT3P45378 269 aaPredicted RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 CHAF1BQ13112 559 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 ZNF658BQ4V348 819 aaPredicted RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 BCL7AQ4VC05 210 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 LACTB2Q53H82 288 aaPredicted RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 CPZQ66K79 652 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 CAPRIN2Q6IMN6 1127 aaKnown RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 D2HGDHQ8N465 521 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 ACRBPQ8NEB7 543 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 ZNF501Q96CX3 271 aaPredicted RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 ZNF514Q96K75 400 aaPredicted RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 ACTL8Q9H568 366 aa19.37■□□□□ 0.69
DDX11-220ENST00000542244 PIH1D1Q9NWS0 290 aaKnown RBP19.37■□□□□ 0.69
DDX11-220ENST00000542244 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.37■□□□□ 0.69
DDX11-220ENST00000542244 LDB2O43679 373 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 ANXA9O76027 345 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 TPH1P17752 444 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 PDHA2P29803 388 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 GPS2Q13227 327 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 IL10RAQ13651 578 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 CCDC181Q5TID7 509 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 DARS2Q6PI48 645 aaKnown RBP19.36■□□□□ 0.69
DDX11-220ENST00000542244 CCDC170Q8IYT3 715 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 PHC3Q8NDX5 983 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 OR4E2Q8NGC2 313 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 DNAJC1Q96KC8 554 aaKnown RBP19.36■□□□□ 0.69
DDX11-220ENST00000542244 KIR3DX1Q9H7L2 352 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 PDE7BQ9NP56 450 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 PCDHGA6Q9Y5G7 932 aa19.36■□□□□ 0.69
DDX11-220ENST00000542244 EPN1Q9Y6I3 576 aaPredicted RBP19.36■□□□□ 0.69
DDX11-220ENST00000542244 UBA6A0AVT1 1052 aaPredicted RBP19.35■□□□□ 0.69
DDX11-220ENST00000542244 GRID2IPA4D2P6 1211 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 C5orf60A6NFR6 353 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 TLCD2A6NGC4 264 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 C2orf81A6NN90 581 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 METTL18O95568 372 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 CCNYL3P0C7X3 344 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 CTNNA2P26232 953 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 HSD11B2P80365 405 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 ABRQ12979 859 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 SPA17Q15506 151 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 ITPRIPL1Q6GPH6 555 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 CDKL3Q8IVW4 592 aaPredicted RBP19.35■□□□□ 0.69
DDX11-220ENST00000542244 KLHDC8BQ8IXV7 354 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 NXPE1Q8N323 547 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 TAB3Q8N5C8 712 aaPredicted RBP19.35■□□□□ 0.69
DDX11-220ENST00000542244 LRRC57Q8N9N7 239 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 LINC00615Q96LM1 132 aaPredicted RBP19.35■□□□□ 0.69
DDX11-220ENST00000542244 SPATA13Q96N96 652 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 TBL1YQ9BQ87 522 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 TLR10Q9BXR5 811 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 KLHL25Q9H0H3 589 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 CRLS1Q9UJA2 301 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 ANAPC2Q9UJX6 822 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 PACSIN2Q9UNF0 486 aaPredicted RBP19.35■□□□□ 0.69
DDX11-220ENST00000542244 POLHQ9Y253 713 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 R3HDM2Q9Y2K5 976 aaKnown RBP19.35■□□□□ 0.69
DDX11-220ENST00000542244 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX11-220ENST00000542244 PCDHB3Q9Y5E6 796 aa19.35■□□□□ 0.69
DDX11-220ENST00000542244 TCRBV7S2A1N4TA0A589 114 aa19.34■□□□□ 0.69
DDX11-220ENST00000542244 CCDC78A2IDD5 438 aa19.34■□□□□ 0.69
DDX11-220ENST00000542244 SLC9B1P1A6NJY1 282 aa19.34■□□□□ 0.69
DDX11-220ENST00000542244 BTN3A3O00478 584 aa19.34■□□□□ 0.69
DDX11-220ENST00000542244 PTPN7P35236 360 aa19.34■□□□□ 0.69
DDX11-220ENST00000542244 PRLHRP49683 370 aa19.34■□□□□ 0.69
DDX11-220ENST00000542244 ZNF75DP51815 510 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms