RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 IVDP26440 423 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 RBMS1P29558 406 aaKnown RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 PDHA2P29803 388 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 EIF2S3P41091 472 aaKnown RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 MLLT3P42568 568 aaPredicted RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 TRA2AQ13595 282 aaKnown RBP eCLIP16.51■□□□□ 0.23
CD9-209ENST00000540891 ARHGAP22Q7Z5H3 698 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 CLEC14AQ86T13 490 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 KLHL7Q8IXQ5 586 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 PPIL6Q8IXY8 311 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 JPH3Q8WXH2 748 aaPredicted RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 RSC1A1Q92681 617 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 OR52A5Q9H2C5 316 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 XAB2Q9HCS7 855 aaKnown RBP16.51■□□□□ 0.23
CD9-209ENST00000540891 THSD1Q9NS62 852 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 PISDQ9UG56 409 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 ZZEF1O43149 2961 aa16.51■□□□□ 0.23
CD9-209ENST00000540891 MN1Q10571 1320 aaPredicted RBP16.5■□□□□ 0.23
CD9-209ENST00000540891 ACACAQ13085 2346 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 DNALI1O14645 258 aaPredicted RBP16.5■□□□□ 0.23
CD9-209ENST00000540891 VAPBO95292 243 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 C9P02748 559 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 GSTM1P09488 218 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 CCL4P13236 92 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 PREPP48147 710 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 ARCN1P48444 511 aaKnown RBP16.5■□□□□ 0.23
CD9-209ENST00000540891 GFERP55789 205 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 ETF1P62495 437 aaKnown RBP16.5■□□□□ 0.23
CD9-209ENST00000540891 GSTM4Q03013 218 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 KIAA0930Q6ICG6 404 aaPredicted RBP16.5■□□□□ 0.23
CD9-209ENST00000540891 LKAAEAR1Q8TD35 194 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 SIGLEC10Q96LC7 697 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 FCRL3Q96P31 734 aaPredicted RBP16.5■□□□□ 0.23
CD9-209ENST00000540891 ZMYND15Q9H091 742 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 VPS37BQ9H9H4 285 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 ASIC3Q9UHC3 531 aa16.5■□□□□ 0.23
CD9-209ENST00000540891 SDR42E2A6NKP2 422 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 GOLGA8KD6RF30 607 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 GOLGA8TH3BQL2 631 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 CCDC188H7C350 402 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 QSOX1O00391 747 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 KRT37O76014 449 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 FTH1P02794 183 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 OR56A5P0C7T3 313 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 JMJD7P0C870 316 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 FGF3P11487 239 aaPredicted RBP16.49■□□□□ 0.23
CD9-209ENST00000540891 AMD1P17707 334 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 CAPZBP47756 277 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 LEPRP48357 1165 aaKnown RBP16.49■□□□□ 0.23
CD9-209ENST00000540891 PPM1FP49593 454 aaPredicted RBP16.49■□□□□ 0.23
CD9-209ENST00000540891 RPA4Q13156 261 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 AARS2Q5JTZ9 985 aaKnown RBP16.49■□□□□ 0.23
CD9-209ENST00000540891 SNAP47Q5SQN1 464 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 NAPRTQ6XQN6 538 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 TMEM135Q86UB9 458 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 JAMLQ86YT9 394 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 DCBLD2Q96PD2 775 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 TTC1Q99614 292 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 P2RY12Q9H244 342 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 RNF14Q9UBS8 474 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 KLHL3Q9UH77 587 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 ANAPC5Q9UJX4 755 aa16.49■□□□□ 0.23
CD9-209ENST00000540891 LAMA5O15230 3695 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 ZCWPW2A0A1B0GU75 182 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 FAM237BA0A1B0GVD1 139 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 SLC5A10A0PJK1 596 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 IQCF5A8MTL0 148 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 A8MU76 341 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 LIN7AO14910 233 aaPredicted RBP16.48■□□□□ 0.23
CD9-209ENST00000540891 PAFAH1B1P43034 410 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 TTPAP49638 278 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 PCBP4P57723 403 aaKnown RBP16.48■□□□□ 0.23
CD9-209ENST00000540891 PPP1CAP62136 330 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 DR1Q01658 176 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 TYSND1Q2T9J0 566 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 ANKRD20A4Q4UJ75 823 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 IZUMO3Q5VZ72 239 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 CASC4Q6P4E1 433 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 SYT10Q6XYQ8 523 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 PLXDC1Q8IUK5 500 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 BMPERQ8N8U9 685 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 AGBL5Q8NDL9 886 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 ZFPM2Q8WW38 1151 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 ELMO1Q92556 727 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 PMEPA1Q969W9 287 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 C9orf72Q96LT7 481 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 TRIM51Q9BSJ1 452 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 KIR3DX1Q9H7L2 352 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 OCIAD1Q9NX40 245 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 IL1RAPL1Q9NZN1 696 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 SLC24A2Q9UI40 661 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 PCDHGA7Q9Y5G6 932 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 PIKFYVEQ9Y2I7 2098 aa16.48■□□□□ 0.23
CD9-209ENST00000540891 URB1O60287 2271 aaKnown RBP16.48■□□□□ 0.23
CD9-209ENST00000540891 MAGEB16A2A368 324 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 C9orf172C9J069 976 aa16.47■□□□□ 0.23
CD9-209ENST00000540891 BHMG1C9JSJ3 638 aaPredicted RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 PRMT5O14744 637 aaPredicted RBP16.47■□□□□ 0.23
CD9-209ENST00000540891 CAPN5O15484 640 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms