RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 FAM26DQ5JW98 314 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ZNF605Q86T29 641 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SERINC5Q86VE9 423 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CBR4Q8N4T8 237 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ANGPTL6Q8NI99 470 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SLC44A1Q8WWI5 657 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 STON2Q8WXE9 905 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ST8SIA2Q92186 375 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 MKRN2Q9H000 416 aaKnown RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 NTN4Q9HB63 628 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 TEX46H3BTG2 121 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SEPT4O43236 478 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 AIREO43918 545 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CHRM5P08912 532 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SPATA31D3P0C874 917 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SLC7A1P30825 629 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ETV3P41162 512 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 PPP3CCP48454 512 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 RGS4P49798 205 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SMARCB1Q12824 385 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 E2F2Q14209 437 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 HACD4Q5VWC8 232 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 C1orf94Q6P1W5 598 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SPATA31D4Q6ZUB0 917 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 DGLUCYQ7Z3D6 616 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ANKRD53Q8N9V6 530 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 GAB3Q8WWW8 586 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 THRSPQ92748 146 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SSX3Q99909 188 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ACBD6Q9BR61 282 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 NXF3Q9H4D5 531 aaKnown RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 COPZ2Q9P299 210 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 KANSL3Q9P2N6 904 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CPA4Q9UI42 421 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 FZD10Q9ULW2 581 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 MAN2B2Q9Y2E5 1009 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 TUBAL3A6NHL2 446 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 WWP2O00308 870 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CA12O43570 354 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 GMFGO60234 142 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 PRG2P13727 222 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 L1CAMP32004 1257 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 INHBCP55103 352 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 DBPQ10586 325 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 RPA4Q13156 261 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ZMYND11Q15326 602 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 BRMS1LQ5PSV4 323 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 HAGHLQ6PII5 290 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CORO6Q6QEF8 472 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 BAIAP2L2Q6UXY1 529 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 TMEM17Q86X19 198 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 TIGD4Q8IY51 512 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SLAIN1Q8ND83 568 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 DNAJA4Q8WW22 397 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SH3BP4Q9P0V3 963 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 MAP10Q9P2G4 905 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 AP1M2Q9Y6Q5 423 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 A0A087X1B8 175 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 UBA6A0AVT1 1052 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 YKT6O15498 198 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 FGF10O15520 208 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SLC2A3P11169 496 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CYBAP13498 195 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 CYP4B1P13584 511 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 RPS3P23396 243 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 PRKCHP24723 683 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ADORA2BP29275 332 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 PDHA2P29803 388 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 MLLT1Q03111 559 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SLC13A2Q13183 592 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 SELPLGQ14242 412 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 ACOX1Q15067 660 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 RNASE12Q5GAN4 147 aaKnown RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 IL23RQ5VWK5 629 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 TIGD7Q6NT04 549 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-214ENST00000540109 OR5H6Q8NGV6 325 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 HTR3CQ8WXA8 447 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 GATAD2BQ8WXI9 593 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 NPY6RQ99463 290 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 NPAS2Q99743 824 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 NKIRAS2Q9NYR9 191 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 RAB23Q9ULC3 237 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 DUSP12Q9UNI6 340 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 POMPQ9Y244 141 aa5.98□□□□□ -1.45
PTPRD-214ENST00000540109 NARSO43776 548 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NIPAL4Q0D2K0 466 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RFTN1Q14699 578 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 ARSKQ6UWY0 536 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TIFABQ6ZNK6 161 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 DPY19L3Q6ZPD9 716 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 TRIM48Q8IWZ4 208 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 DCP1BQ8IZD4 617 aaKnown RBP5.97□□□□□ -1.45
PTPRD-214ENST00000540109 CACTIN-AS1Q8N1I8 211 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 PQLC3Q8N755 202 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 FAM156AQ8NDB6 213 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 SLC2A14Q8TDB8 520 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 NCSTNQ92542 709 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 RIT1Q92963 219 aa5.97□□□□□ -1.45
PTPRD-214ENST00000540109 GBA3Q9H227 469 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms