RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 HHIPQ96QV1 700 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 OR2M4Q96R27 311 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 EGFL8Q99944 293 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 GPR174Q9BXC1 333 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 C1QTNF1Q9BXJ1 281 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 SLC12A9Q9BXP2 914 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ERVK-6Q9BXR3 956 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 GSDMCQ9BYG8 508 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 DRC3Q9H069 523 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 PCBD2Q9H0N5 130 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ALG9Q9H6U8 611 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 IGSF5Q9NSI5 407 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 KLQ9UEF7 1012 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 SERGEFQ9UGK8 458 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ZNHIT2Q9UHR6 403 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 LNPEPQ9UIQ6 1025 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 APOBEC2Q9Y235 224 aaKnown RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 COQ6Q9Y2Z9 468 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 ANGPTL3Q9Y5C1 460 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 BRWD1Q9NSI6 2320 aa11.58□□□□□ -0.56
VTN-202ENST00000539746 TCF20Q9UGU0 1960 aaKnown RBP11.58□□□□□ -0.56
VTN-202ENST00000539746 OR2AG2A6NM03 316 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 TRPC5OSA6NMA1 111 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 METTL12A8MUP2 240 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 GPC4O75487 556 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 CRCPO75575 148 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 POP7O75817 140 aaKnown RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 WISP3O95389 354 aaPredicted RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 TNFP01375 233 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 KCNA4P22459 653 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ACSL1P33121 698 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 METAP1P53582 386 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 PNLIPRP1P54315 467 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 SEMG2Q02383 582 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 MTAPQ13126 283 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 KRT33BQ14525 404 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 CHI3L2Q15782 390 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ZNF789Q5FWF6 425 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 PPM1JQ5JR12 505 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 WASH2PQ6VEQ5 465 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 UBE2R2Q712K3 238 aaPredicted RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 DET1Q7L5Y6 550 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ABI3BPQ7Z7G0 1075 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ISCA2Q86U28 154 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 GBP7Q8N8V2 638 aaPredicted RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 MDM1Q8TC05 714 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 EEF1AKMT1Q8WVE0 214 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 STON2Q8WXE9 905 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 CCT6BQ92526 530 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 SNX19Q92543 992 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 RAD51AP1Q96B01 352 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 L3HYPDHQ96EM0 354 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 SCARF2Q96GP6 870 aaPredicted RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 SMIM14Q96QK8 99 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 BOCQ9BWV1 1114 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 DUSP15Q9H1R2 295 aaPredicted RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 TRIT1Q9H3H1 467 aaKnown RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 MVB12BQ9H7P6 319 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 COG4Q9H9E3 785 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 WASH6PQ9NQA3 447 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 AASDHPPTQ9NRN7 309 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ARL15Q9NXU5 204 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 TMEM216Q9P0N5 145 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 SLC17A7Q9P2U7 560 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ATXN10Q9UBB4 475 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 ZFR2Q9UPR6 939 aaKnown RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.57□□□□□ -0.56
VTN-202ENST00000539746 DGKBQ9Y6T7 804 aa11.57□□□□□ -0.56
VTN-202ENST00000539746 IGHV1OR15-9A0A0B4J2B8 117 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 TMEM221A6NGB7 291 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 SHISA7A6NL88 538 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 TCP11X1B4DZS4 312 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 M0R296 226 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 PLK4O00444 970 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 VPS4BO75351 444 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 SOD1P00441 154 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 OTCP00480 354 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 GM2AP17900 193 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 MAT2AP31153 395 aaKnown RBP11.56□□□□□ -0.56
VTN-202ENST00000539746 CCR7P32248 378 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 ABCG1P45844 678 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 GLRBP48167 497 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 RPIAP49247 311 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 AFF3P51826 1226 aaKnown RBP11.56□□□□□ -0.56
VTN-202ENST00000539746 PKNOX1P55347 436 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 C21orf59P57076 290 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 PFN3P60673 137 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 ABCE1P61221 599 aaKnown RBP11.56□□□□□ -0.56
VTN-202ENST00000539746 B4GALNT1Q00973 533 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 PPARDQ03181 441 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 ZNF33BQ06732 778 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 RCN2Q14257 317 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 GBX1Q14549 363 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 SETDB1Q15047 1291 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 ELOCQ15369 112 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 ZRSR2Q15696 482 aaKnown RBP11.56□□□□□ -0.56
VTN-202ENST00000539746 LRRC70Q7Z2Q7 622 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 BMP8AQ7Z5Y6 402 aa11.56□□□□□ -0.56
VTN-202ENST00000539746 PDZD3Q86UT5 571 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms