RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	TAS2R42	Q7RTR8	314 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	PDZD3	Q86UT5	571 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	BPHL	Q86WA6	291 aa	Predicted RBP	12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	KLHL6	Q8WZ60	621 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	UBXN4	Q92575	508 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	SLCO2A1	Q92959	643 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	HDAC10	Q969S8	669 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	WBP1	Q96G27	269 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	INSM2	Q96T92	566 aa	Predicted RBP	12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	TBC1D10A	Q9BXI6	508 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	OR52A5	Q9H2C5	316 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	ZNF768	Q9H5H4	540 aa	Known RBP	12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	COG4	Q9H9E3	785 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	XAB2	Q9HCS7	855 aa	Known RBP	12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	NEU2	Q9Y3R4	380 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	PCDHB11	Q9Y5F2	797 aa		12.03	□□□□□ -0.48
CLTCL1-205	ENST00000538828	ZFHX4	Q86UP3	3567 aa		12.02	□□□□□ -0.48
CLTCL1-205	ENST00000538828	PMS2P1	A4D2B8	440 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	C9orf172	C9J069	976 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	STMND1	H3BQB6	276 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	IFRD1	O00458	451 aa	Predicted RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KLK10	O43240	276 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PHF2	O75151	1096 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GOT2	P00505	430 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OR56A5	P0C7T3	313 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	HGF	P14210	728 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ITIH1	P19827	911 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ITPKB	P27987	946 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ETV5	P41161	510 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CDKN1C	P49918	316 aa	Predicted RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ADAR	P55265	1226 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CLN3	Q13286	438 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MAP7	Q14244	749 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	IL11RA	Q14626	422 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SEPT7	Q16181	437 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FASTKD1	Q53R41	847 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	DCAF12	Q5T6F0	453 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PAPD7	Q5XG87	772 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FOXR1	Q6PIV2	292 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CCDC137	Q6PK04	289 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ZNF534	Q76KX8	674 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	DET1	Q7L5Y6	550 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GPR155	Q7Z3F1	870 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	LRRC6	Q86X45	466 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ZNF761	Q86XN6	746 aa	Predicted RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CFAP206	Q8IYR0	622 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RCBTB1	Q8NDN9	531 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ACVR1C	Q8NER5	493 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	USP7	Q93009	1102 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	C12orf66	Q96MD2	445 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RUNDC3B	Q96NL0	473 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	FCRL4	Q96PJ5	515 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TCF12	Q99081	682 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CARD6	Q9BX69	1037 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TSSK1B	Q9BXA7	367 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SPRY4	Q9C004	299 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TRIT1	Q9H3H1	467 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KCND1	Q9NSA2	647 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SIDT1	Q9NXL6	827 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SMARCAL1	Q9NZC9	954 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TMEM9	Q9P0T7	183 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RNF14	Q9UBS8	474 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLC24A2	Q9UI40	661 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ANAPC5	Q9UJX4	755 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SOX13	Q9UN79	622 aa		12.02	□□□□□ -0.49
CLTCL1-205	ENST00000538828	MGA	Q8IWI9	3026 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PRAMEF33	A0A0G2JMD5	474 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLC5A10	A0PJK1	596 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828		K7ENP7	123 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TK2	O00142	265 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CCL22	O00626	93 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PRMT5	O14744	637 aa	Predicted RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PFDN6	O15212	129 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CAPN5	O15484	640 aa	Predicted RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PRAMEF10	O60809	474 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	KRT14	P02533	472 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CCL4	P13236	92 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RPS3	P23396	243 aa	Known RBP eCLIP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RHD	Q02161	417 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	VAC14	Q08AM6	782 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GPS1	Q13098	491 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CCDC38	Q502W7	563 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	INO80C	Q6PI98	192 aa	Predicted RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	C19orf48	Q6RUI8	117 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	PRUNE1	Q86TP1	453 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OOSP2	Q86WS3	158 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	JAML	Q86YT9	394 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TAB3	Q8N5C8	712 aa	Predicted RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	GPR150	Q8NGU9	434 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	OR6P1	Q8NGX9	317 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	COG1	Q8WTW3	980 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	SLC41A2	Q96JW4	573 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	RMDN2	Q96LZ7	410 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ZNF778	Q96MU6	729 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	CCNL2	Q96S94	520 aa	Predicted RBP	12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	ZMYND15	Q9H091	742 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	WWP1	Q9H0M0	922 aa		12.01	□□□□□ -0.49
CLTCL1-205	ENST00000538828	TFB2M	Q9H5Q4	396 aa	Known RBP	12.01	□□□□□ -0.49

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