RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNHIT2Q9UHR6 403 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 DNAJC16Q9Y2G8 782 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 HS3ST3A1Q9Y663 406 aa13.9□□□□□ -0.18
CD4-208ENST00000538827 ATXN2Q99700 1313 aaKnown RBP13.9□□□□□ -0.19
CD4-208ENST00000538827 CCDC163A0A0D9SF12 145 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 BTN3A1O00481 513 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 KPNA5O15131 536 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 TM9SF1O15321 606 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 GRID2O43424 1007 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 NUAK1O60285 661 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 THEGLP0DJG4 465 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 COL6A2P12110 1019 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 ACP5P13686 325 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 TFEBP19484 476 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 CD9P21926 228 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 DGKAP23743 735 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 CD27P26842 260 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 MAOBP27338 520 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 GNPDA1P46926 289 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 PREPP48147 710 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 DHPSP49366 369 aaPredicted RBP13.89□□□□□ -0.19
CD4-208ENST00000538827 PFN3P60673 137 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 HSPA14Q0VDF9 509 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 TCEA2Q15560 299 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 ACSBG2Q5FVE4 666 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 TPRG1LQ5T0D9 272 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 LVRNQ6Q4G3 990 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 LPCAT2Q7L5N7 544 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 ABI3BPQ7Z7G0 1075 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 MAML2Q8IZL2 1156 aaPredicted RBP13.89□□□□□ -0.19
CD4-208ENST00000538827 ARMC2Q8NEN0 867 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 OR56A4Q8NGH8 313 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 HM13Q8TCT9 377 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 OR1E3Q8WZA6 343 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 TMEM159Q96B96 161 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 PDXPQ96GD0 296 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 ALG9Q9H6U8 611 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 CARS2Q9HA77 564 aaKnown RBP13.89□□□□□ -0.19
CD4-208ENST00000538827 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 CYP4F12Q9HCS2 524 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.89□□□□□ -0.19
CD4-208ENST00000538827 FBXO4Q9UKT5 387 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 GRID1Q9ULK0 1009 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 SUFUQ9UMX1 484 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 GPSM3Q9Y4H4 160 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 PCDHGA2Q9Y5H1 932 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 PCYT1BQ9Y5K3 369 aaPredicted RBP13.89□□□□□ -0.19
CD4-208ENST00000538827 SLCO1B1Q9Y6L6 691 aa13.89□□□□□ -0.19
CD4-208ENST00000538827 TNRC6BQ9UPQ9 1833 aaKnown RBP13.89□□□□□ -0.19
CD4-208ENST00000538827 ABCA7Q8IZY2 2146 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 PRSS38A1L453 326 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 GPR89AB7ZAQ6 455 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 TK2O00142 265 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 KMOO15229 486 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 ZBTB14O43829 449 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 LILRB5O75023 590 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 POP7O75817 140 aaKnown RBP13.88□□□□□ -0.19
CD4-208ENST00000538827 PROCP04070 461 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 CEACAM5P06731 702 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 GPR89BP0CG08 455 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 NEFHP12036 1026 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 CD1DP15813 335 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 AOAHP28039 575 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 YPEL5P62699 121 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 MPP2Q14168 576 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 CCDC153Q494R4 210 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 TECRLQ5HYJ1 363 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 WDR45BQ5MNZ6 344 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 PLEKHS1Q5SXH7 462 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 FRA10AC1Q70Z53 315 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 CEP68Q76N32 757 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 CHST15Q7LFX5 561 aaPredicted RBP13.88□□□□□ -0.19
CD4-208ENST00000538827 RD3Q7Z3Z2 195 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 ZNF547Q8IVP9 402 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 EEF1AKMT1Q8WVE0 214 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 GAB3Q8WWW8 586 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 KLHDC7BQ96G42 594 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 OR2M4Q96R27 311 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 ORAI3Q9BRQ5 295 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 DERL2Q9GZP9 239 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 OSGEPL1Q9H4B0 414 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 RMI1Q9H9A7 625 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 COG4Q9H9E3 785 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 LATS2Q9NRM7 1088 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 INTS9Q9NV88 658 aaKnown RBP13.88□□□□□ -0.19
CD4-208ENST00000538827 CPSF2Q9P2I0 782 aaKnown RBP13.88□□□□□ -0.19
CD4-208ENST00000538827 MID2Q9UJV3 735 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 EMCNQ9ULC0 261 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 SLC17A4Q9Y2C5 497 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 PLLPQ9Y342 182 aa13.88□□□□□ -0.19
CD4-208ENST00000538827 ZFC3H1O60293 1989 aaKnown RBP13.88□□□□□ -0.19
CD4-208ENST00000538827 WDR91A4D1P6 747 aa13.87□□□□□ -0.19
CD4-208ENST00000538827 TOR1BO14657 336 aa13.87□□□□□ -0.19
CD4-208ENST00000538827 CHUKO15111 745 aa13.87□□□□□ -0.19
CD4-208ENST00000538827 PLIN3O60664 434 aa13.87□□□□□ -0.19
CD4-208ENST00000538827 RASGRP1O95267 797 aa13.87□□□□□ -0.19
CD4-208ENST00000538827 HOXC4P09017 264 aaPredicted RBP13.87□□□□□ -0.19
CD4-208ENST00000538827 CBSLP0DN79 551 aa13.87□□□□□ -0.19
CD4-208ENST00000538827 ENO3P13929 434 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms