RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GIPC1O14908 333 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PFDN1O60925 122 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TMCC2O75069 709 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 RFPL3O75679 317 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SRP72O76094 671 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MT-CO1P00395 513 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CCDC166P0CW27 439 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ITGAXP20702 1163 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ZNF10P21506 573 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SHMT2P34897 504 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DRD3P35462 400 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 RAB15P59190 212 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ABATP80404 500 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CDK3Q00526 305 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CTBSQ01459 385 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ACVR1Q04771 509 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 KLC1Q07866 573 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 FAPQ12884 760 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PDE1CQ14123 709 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ARHGAP19Q14CB8 494 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 IRF4Q15306 451 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 BCL2A1Q16548 175 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PLA2G2CQ5R387 149 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 STPG1Q5TH74 334 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TMPRSS12Q86WS5 348 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TRAPPC5Q8IUR0 188 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 HID1Q8IV36 788 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TMEFF1Q8IYR6 380 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MINDY1Q8N5J2 469 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PDCD7Q8N8D1 485 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TMEM145Q8NBT3 493 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 OR4C6Q8NH72 309 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MCOLN3Q8TDD5 553 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TRPC4APQ8TEL6 797 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SETD7Q8WTS6 366 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DYDC1Q8WWB3 177 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 INPP5DQ92835 1189 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 RAD51AP1Q96B01 352 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ALKBH8Q96BT7 664 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SDCCAG3Q96C92 435 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 THAP11Q96EK4 314 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SEC16BQ96JE7 1060 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MRGPRX2Q96LB1 330 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TMEM121Q9BTD3 319 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 RIOK2Q9BVS4 552 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 AP1M1Q9BXS5 423 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PITHD1Q9GZP4 211 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 KCNF1Q9H3M0 494 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 C6orf106Q9H6K1 298 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CARS2Q9HA77 564 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 HHATLQ9HCP6 504 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SARS2Q9NP81 518 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ANLNQ9NQW6 1124 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 KLC4Q9NSK0 619 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MOCS1Q9NZB8 636 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SLC17A4Q9Y2C5 497 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NEU2Q9Y3R4 380 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MTF2Q9Y483 593 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 URADA6NGE7 173 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 POM121CA8CG34 1229 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 H0YC42 278 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 HGSO14964 777 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SNPHO15079 494 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PI15O43692 258 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NUAK1O60285 661 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DNAJC6O75061 913 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 H2AFYO75367 372 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SASH3O75995 380 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PIGNO95427 931 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PRAMEF1O95521 474 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PEX11BO96011 259 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SFTPCP11686 197 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 COL6A2P12110 1019 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ENGP17813 658 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MC4RP32245 332 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ACSL1P33121 698 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ADRA1AP35348 466 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GRK3P35626 688 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 HK3P52790 923 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 AP1S2P56377 157 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MRPS35P82673 323 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ACY1Q03154 408 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DMWDQ09019 674 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 IFFO1Q0D2I5 559 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NIPAL4Q0D2K0 466 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GRIK2Q13002 908 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 E2F2Q14209 437 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GRAMD1BQ3KR37 738 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 C6orf132Q5T0Z8 1188 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 BROXQ5VW32 411 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 KIAA1211LQ6NV74 962 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NPNTQ6UXI9 565 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 EFL1Q7Z2Z2 1120 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ADAMTSL2Q86TH1 951 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 HEATR4Q86WZ0 1026 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SYTL1Q8IYJ3 562 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SUMF1Q8NBK3 374 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TP53I13Q8NBR0 393 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MDM1Q8TC05 714 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 LMX1AQ8TE12 382 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms