RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TK2O00142 265 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 VILLO15195 856 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GCATO75600 419 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 KRT34O76011 436 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 TTC4O95801 387 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 OLFM2O95897 454 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 AHSGP02765 367 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 C2P06681 752 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CREB1P16220 341 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CYP2A7P20853 494 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 NEK2P51955 445 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 LRRC74AQ0VAA2 488 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 TMEM164Q5U3C3 297 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CACHD1Q5VU97 1274 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 TMEM184AQ6ZMB5 413 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CYP4V2Q6ZWL3 525 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 RTL10Q7L3V2 364 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 LIMS2Q7Z4I7 341 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 MR1Q95460 341 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CNDP2Q96KP4 475 aaKnown RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 STMN4Q9H169 189 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 RETREG1Q9H6L5 497 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 OBP2AQ9NY56 170 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 IL37Q9NZH6 218 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 XPR1Q9UBH6 696 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 RNF215Q9Y6U7 377 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 TCRBV5S1A1TA0A578 114 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 UBXN8O00124 270 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 B4GALT2O60909 372 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PSMB5P28074 263 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 DRD3P35462 400 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 NSG1P42857 185 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FOXL2P58012 376 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 OLR1P78380 273 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 IRF9Q00978 393 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 C18orf21Q32NC0 220 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 PLK5Q496M5 336 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ACSBG2Q5FVE4 666 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PNCKQ6P2M8 343 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 SNX20Q7Z614 316 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GALNT10Q86SR1 603 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 GKN2Q86XP6 184 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 NXPE1Q8N323 547 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 HIPK4Q8NE63 616 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 METTL6Q8TCB7 284 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 PTCD2Q8WV60 388 aaKnown RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 MARK4Q96L34 752 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 CENPKQ9BS16 269 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ZSCAN5AQ9BUG6 496 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 SCHIP1Q9P0W5 487 aaPredicted RBP7.11□□□□□ -1.27
MSH6-209ENST00000538136 SH3BGRL2Q9UJC5 107 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 FREM2Q5SZK8 3169 aa7.11□□□□□ -1.27
MSH6-209ENST00000538136 ZNF236Q9UL36 1845 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 SHROOM3Q8TF72 1996 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ARHGEF17Q96PE2 2063 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 LOC730098B7Z3J9 87 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 H0YHG0 523 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ZMPSTE24O75844 475 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 LDOC1O95751 146 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 OAS2P29728 719 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 SOAT1P35610 550 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CLCN5P51795 746 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 HK3P52790 923 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 RACK1P63244 317 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 LAMB3Q13751 1172 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ZRSR2Q15696 482 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 CHI3L2Q15782 390 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 AGAP9Q5VTM2 703 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 LVRNQ6Q4G3 990 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 C11orf74Q86VG3 221 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 OR5M3Q8NGP4 307 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ZNF599Q96NL3 588 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 GFM1Q96RP9 751 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 MGME1Q9BQP7 344 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 PRO3102Q9H379 93 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 SLC22A14Q9Y267 594 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 NUP214P35658 2090 aaPredicted RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 ABCA2Q9BZC7 2435 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 PKDREJQ9NTG1 2253 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 FEZF1A0PJY2 475 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CAPN8A6NHC0 703 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ANKDD1BA6NHY2 528 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 LRRC14BA6NHZ5 514 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 YY2O15391 372 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 RPLP0P05388 317 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 ITGA2BP08514 1039 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 MYL2P10916 166 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 MAGP20916 626 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 DGKAP23743 735 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CD27P26842 260 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 CCT8P50990 548 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 MMEL1Q495T6 779 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 RNASEH2BQ5TBB1 312 aaKnown RBP7.1□□□□□ -1.27
MSH6-209ENST00000538136 AGBL4Q5VU57 503 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 UGT3A1Q6NUS8 523 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 ZNF438Q7Z4V0 828 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 SLC26A11Q86WA9 606 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 TMEM126BQ8IUX1 230 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 MYRIPQ8NFW9 859 aa7.1□□□□□ -1.27
MSH6-209ENST00000538136 PIH1D2Q8WWB5 315 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms