RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 HTR6P50406 440 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 POLR2JP52435 117 aaKnown RBP15.4■□□□□ 0.06
MKS1-204ENST00000537529 NR6A1Q15406 480 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 ZNF77Q15935 545 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 ATP13A5Q4VNC0 1218 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 IRAK1BP1Q5VVH5 260 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 HOMEZQ8IX15 550 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 ADGRG2Q8IZP9 1017 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 SFRP1Q8N474 314 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 CHST14Q8NCH0 376 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 ZUFSPQ96AP4 578 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 RHBDF1Q96CC6 855 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 LRCH3Q96II8 777 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 RAD9AQ99638 391 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 TMEM79Q9BSE2 394 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 TLR9Q9NR96 1032 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 GEMIN8Q9NWZ8 242 aaKnown RBP15.4■□□□□ 0.06
MKS1-204ENST00000537529 PKD2L2Q9NZM6 624 aa15.4■□□□□ 0.06
MKS1-204ENST00000537529 IGLV3-16A0A075B6K0 115 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 DYTNA2CJ06 578 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 TXNDC9O14530 226 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 XYLBO75191 536 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 KATNA1O75449 491 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CAPNS1P04632 268 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CYP2A6P11509 494 aaPredicted RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 MSH3P20585 1137 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 HOXA9P31269 272 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 HSPA13P48723 471 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 PIK3CGP48736 1102 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 SPINT3P49223 89 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 UFM1P61960 85 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 EMX2Q04743 252 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 ARHGEF7Q14155 803 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CAPRIN1Q14444 709 aaKnown RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 BRAT1Q6PJG6 821 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CYP2R1Q6VVX0 501 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 Q6ZSR9 355 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 ADIPOR2Q86V24 386 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 TICAM1Q8IUC6 712 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 SLC15A3Q8IY34 581 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 AHI1Q8N157 1196 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 TMEM102Q8N9M5 508 aaPredicted RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 OR2T34Q8NGX1 318 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 OR2T3Q8NH03 318 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 K7EPI3 171 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 DNAJA2O60884 412 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 RNASEH1O60930 286 aaKnown RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 ZNF30P17039 623 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 POLR2EP19388 210 aaKnown RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 SLC6A2P23975 617 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 ZFP36L2P47974 494 aaKnown RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 FOLH1Q04609 750 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 SLC5A9Q2M3M2 681 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CDKL4Q5MAI5 379 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 LY6G5CQ5SRR4 150 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 OR2A12Q8NGT7 310 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 VPS33AQ96AX1 596 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 OTUB2Q96DC9 234 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 TEX37Q96LM6 180 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 PPP3R2Q96LZ3 170 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 MUC13Q9H3R2 512 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CMTM6Q9NX76 183 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 CXXC1Q9P0U4 656 aaPredicted RBP15.39■□□□□ 0.05
MKS1-204ENST00000537529 RAB26Q9ULW5 256 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 ERVW-1Q9UQF0 538 aa15.39■□□□□ 0.05
MKS1-204ENST00000537529 ASPDHA6ND91 283 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 GRXCR2A6NFK2 248 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 LSM1O15116 133 aaKnown RBP15.38■□□□□ 0.05
MKS1-204ENST00000537529 WDR47O94967 919 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 HNRNPA1P09651 372 aaKnown RBP eCLIP15.38■□□□□ 0.05
MKS1-204ENST00000537529 B4GALNT1Q00973 533 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 FPGSQ05932 587 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 PRKG2Q13237 762 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 TTC23LQ6PF05 361 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 RNF165Q6ZSG1 346 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 ZFAND4Q86XD8 727 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 PIP4K2CQ8TBX8 421 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 SLC45A3Q96JT2 553 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 HEPHQ9BQS7 1158 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 LINC00597Q9H2U6 94 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 MARK1Q9P0L2 795 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 TRPS1Q9UHF7 1281 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 ZMYM5Q9UJ78 669 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 CNOT11Q9UKZ1 510 aaKnown RBP15.38■□□□□ 0.05
MKS1-204ENST00000537529 PCDHA9Q9Y5H5 950 aa15.38■□□□□ 0.05
MKS1-204ENST00000537529 AQP12BA6NM10 295 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 SLC28A1O00337 649 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 TLL1O43897 1013 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 NPPAP01160 153 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 ANXA5P08758 320 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 ENO2P09104 434 aaPredicted RBP15.37■□□□□ 0.05
MKS1-204ENST00000537529 ATP6V1B2P21281 511 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 NFKBIAP25963 317 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 VIPR1P32241 457 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 ABRAXAS2Q15018 415 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 TIGD2Q4W5G0 525 aa15.37■□□□□ 0.05
MKS1-204ENST00000537529 LRRC73Q5JTD7 316 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms