RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CYP3A7P24462 503 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ARCN1P48444 511 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CDKL1Q00532 357 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 TUSC3Q13454 348 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF234Q14588 700 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CEP68Q76N32 757 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 MKL1Q969V6 931 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 RBM18Q96H35 190 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CXorf21Q9HAI6 301 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 MAP4K5Q9Y4K4 846 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 DGKBQ9Y6T7 804 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 NME6O75414 186 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CCNB2O95067 398 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 FKBP1AP62942 108 aaKnown RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SLC9B1Q4ZJI4 515 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PPP1R26Q5T8A7 1209 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 MFSD5Q6N075 450 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 USP30Q70CQ3 517 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CBR4Q8N4T8 237 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 C4orf32Q8N8J7 132 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 NXNL1Q96CM4 212 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 C12orf66Q96MD2 445 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 GLIS2Q9BZE0 524 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ANKRA2Q9H9E1 313 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PAK6Q9NQU5 681 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 AASSQ9UDR5 926 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 COL1A1P02452 1464 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PRAMEF33A0A0G2JMD5 474 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PDCD5O14737 125 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PRAMEF10O60809 474 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 APODP05090 189 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 UGT2B4P06133 528 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SLC35G6P0C7Q6 338 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PRDX6P30041 224 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 OR1D2P34982 312 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 RPIAP49247 311 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ARF3P61204 181 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ARF1P84077 181 aaKnown RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SDHAF4Q5VUM1 108 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SLITRK4Q8IW52 837 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 AIFM2Q9BRQ8 373 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 TTPALQ9BTX7 342 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ALG2Q9H553 416 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 MOV10Q9HCE1 1003 aaKnown RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 MED11Q9P086 117 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 MID1O15344 667 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PAPSS2O95340 614 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PRNPP04156 253 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 VARSP26640 1264 aaKnown RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SLC6A4P31645 630 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ICAM3P32942 547 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 RYKP34925 604 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 TNFSF9P41273 254 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 GRK6P43250 576 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 OR3A3P47888 321 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 OR3A2P47893 321 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ILF3Q12906 894 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 HEPACAMQ14CZ8 416 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 INTS6LQ5JSJ4 861 aaKnown RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 C1orf189Q5VU69 101 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CATSPERGQ6ZRH7 1159 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 GPC2Q8N158 579 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 OR6K2Q8NGY2 324 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 COPS5Q92905 334 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PPP1R14BQ96C90 147 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ERMAPQ96PL5 475 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CSPG4P5Q96PW8 444 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 GPR21Q99679 349 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 TCF7L1Q9HCS4 588 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 RAI2Q9Y5P3 530 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 E7ENX8 843 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CLDN5O00501 218 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 RHOQP17081 205 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 MINDY4Q4G0A6 757 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 NUP54Q7Z3B4 507 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 FAM124AQ86V42 546 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PLCZ1Q86YW0 608 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SUN5Q8TC36 379 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ROPN1LQ96C74 230 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 COPS4Q9BT78 406 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 FAM83DQ9H4H8 585 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PDE10AQ9Y233 779 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PRKAB1Q9Y478 270 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 TELO2Q9Y4R8 837 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 MYH7BA7E2Y1 1941 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 C1RP00736 705 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SP100P23497 879 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 PITPNAQ00169 270 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 ECT2LQ008S8 904 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CLCQ05315 142 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 SLC26A9Q7LBE3 791 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 C12orf29Q8N999 325 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 DDX4Q9NQI0 724 aaKnown RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 GIN1Q9NXP7 522 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 CFAP97Q9P2B7 532 aa10.51□□□□□ -0.73
CLIP1-209ENST00000537178 STOX2Q9P2F5 926 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-209ENST00000537178 TIMM22Q9Y584 194 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms