RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 MAN2B2Q9Y2E5 1009 aa19.21■□□□□ 0.67
TNFRSF1B-204ENST00000536782 C5orf60A6NFR6 353 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SRP72O76094 671 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 LCA5LO95447 670 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 NTRK1P04629 796 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SLC35G4P0C7Q5 338 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PYGMP11217 842 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 NR1D1P20393 614 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TUBB4BP68371 445 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TUBB2AQ13885 445 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 UBAP2LQ14157 1087 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 DUS1LQ6P1R4 473 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 RANBP10Q6VN20 620 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ASB18Q6ZVZ8 466 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TEX19Q8NA77 164 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KRT35Q92764 455 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 GORASP1Q9BQQ3 440 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TUBB2BQ9BVA1 445 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 GPR87Q9BY21 358 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ACTL8Q9H568 366 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KIR3DX1Q9H7L2 352 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 FAM8A1Q9UBU6 413 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SLC24A2Q9UI40 661 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 FKBPLQ9UIM3 349 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TLK1Q9UKI8 766 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 AAR2Q9Y312 384 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PCDHA13Q9Y5I0 950 aa19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PRRC2CQ9Y520 2896 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SPTBP11277 2137 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OR6C74A6NCV1 312 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 K7EM74 188 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CPNE3O75131 537 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ZBTB11O95625 1053 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 COPS2P61201 443 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PDE1BQ01064 536 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PRPSAP1Q14558 356 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 GSE1Q14687 1217 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SPA17Q15506 151 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 BCL7AQ4VC05 210 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TMTC4Q5T4D3 741 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 FAM199XQ6PEV8 388 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 DAAM2Q86T65 1068 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CARFQ8N187 725 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TC2NQ8N9U0 490 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SPDYE1Q8NFV5 336 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 NAT14Q8WUY8 206 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 DCUN1D1Q96GG9 259 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 LINC00615Q96LM1 132 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 APOL2Q9BQE5 337 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 AKIRIN1Q9H9L7 192 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 LUC7LQ9NQ29 371 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CRLS1Q9UJA2 301 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TFR2Q9UP52 801 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 COLEC10Q9Y6Z7 277 aa19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TNRC6AQ8NDV7 1962 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ICE1Q9Y2F5 2266 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SCRG1O75711 98 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CRTAMO95727 393 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 POLBP06746 335 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 RALBP11234 206 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PTPN4P29074 926 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ADRA1AP35348 466 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 RPS15P62841 145 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SEMA5AQ13591 1074 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KRT33BQ14525 404 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ANKRD20A2Q5SQ80 823 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ANKRD20A1Q5TYW2 823 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ANKRD20A3Q5VUR7 823 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TMEM126BQ8IUX1 230 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CDKL3Q8IVW4 592 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 APLFQ8IW19 511 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CFAP206Q8IYR0 622 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OR8K5Q8NH50 307 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ACTL9Q8TC94 416 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ULK4Q96C45 1275 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 RUFY1Q96T51 708 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KCND1Q9NSA2 647 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ANKMY1Q9P2S6 941 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 TEX15Q9BXT5 2789 aa19.18■□□□□ 0.66
TNFRSF1B-204ENST00000536782 MACROD2A1Z1Q3 448 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CLEC18AA5D8T8 446 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 AGAP14A8MT82 685 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 STK10O94804 968 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CTNNA2P26232 953 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PSMB4P28070 264 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 NDUFS1P28331 727 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 KPNA2P52292 529 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 XIAPP98170 497 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OTUD4Q01804 1114 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 PRKAA1Q13131 559 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 OLIG2Q13516 323 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 GPR19Q15760 415 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 UGT8Q16880 541 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CAPRIN2Q6IMN6 1127 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CLEC18BQ6UXF7 455 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 SYVN1Q86TM6 617 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CCDC170Q8IYT3 715 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 CLEC18CQ8NCF0 446 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 THAP4Q8WY91 577 aa19.17■□□□□ 0.66
TNFRSF1B-204ENST00000536782 ZNF501Q96CX3 271 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms