RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 BMPERQ8N8U9 685 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 OR52K1Q8NGK4 314 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GPR150Q8NGU9 434 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 STYXQ8WUJ0 223 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CXorf40BQ96DE9 158 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CDKN2AIPNLQ96HQ2 116 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TAAR9Q96RI9 348 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RAB17Q9H0T7 212 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PSMD13Q9UNM6 376 aa17.5■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MGAT4DA6NG13 374 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MROH6A6NGR9 719 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 EFCAB8A8MWE9 144 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 UBXN7O94888 489 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PRSS56P0CW18 603 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 LIPCP11150 499 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TYRP1P17643 537 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PSMA3P25788 255 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GRIA1P42261 906 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 HALP42357 657 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GFERP55789 205 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SARNPP82979 210 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SEPT6Q14141 434 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GPR33Q49SQ1 333 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ARHGAP40Q5TG30 622 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TMEM164Q5U3C3 297 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ZFAND4Q86XD8 727 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 DTX1Q86Y01 620 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RBM12BQ8IXT5 1001 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 DNAAF3Q8N9W5 541 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 OR2L2Q8NH16 312 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SNRNP27Q8WVK2 155 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CPT1BQ92523 772 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ART4Q93070 314 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 KLHL3Q9UH77 587 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 UTP11Q9Y3A2 253 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PCDHGA3Q9Y5H0 932 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 B3GALT1Q9Y5Z6 326 aa17.49■□□□□ 0.39
TNFRSF1A-209ENST00000536717 IGLV3-16A0A075B6K0 115 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TEX51A0A1B0GUA7 166 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 EFCAB7A8K855 629 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 DNALI1O14645 258 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 NDC80O14777 642 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 C9P02748 559 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ACRV1P26436 265 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CD82P27701 267 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MAGEA6P43360 314 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PRLHRP49683 370 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 MRPS25P82663 173 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CDH17Q12864 832 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SRSF6Q13247 344 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 KCNJ11Q14654 390 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RPE65Q16518 533 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 FAM129CQ86XR2 697 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PLXDC1Q8IUK5 500 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PPIL6Q8IXY8 311 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RSC1A1Q92681 617 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 DCUN1D1Q96GG9 259 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 COPS8Q99627 209 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ERP44Q9BS26 406 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TRIM31Q9BZY9 425 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SPTBP11277 2137 aa17.48■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CCDC78A2IDD5 438 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 B4E171 279 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 AP3B1O00203 1094 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 EFSO43281 561 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RALBP11234 206 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ATP1B2P14415 290 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 AMD1P17707 334 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 TSPAN7P41732 249 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CAPZBP47756 277 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 VAC14Q08AM6 782 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CCDC38Q502W7 563 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ZRANB3Q5FWF4 1079 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 IZUMO3Q5VZ72 239 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SERPINA9Q86WD7 417 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 PIANPQ8IYJ0 282 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 LILRA3Q8N6C8 439 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 NOA1Q8NC60 698 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SNF8Q96H20 258 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 UBL7Q96S82 380 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CCNL2Q96S94 520 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 DDA1Q9BW61 102 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SLC39A1Q9NY26 324 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ZDHHC3Q9NYG2 299 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 FAM8A1Q9UBU6 413 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 KLHL33A6NCF5 533 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 CFAP99D6REC4 459 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 K7ENP7 123 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 ANKRD34CP0C6C1 535 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 IVDP26440 423 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 GLE1Q53GS7 698 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 RNASEH2BQ5TBB1 312 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 INO80CQ6PI98 192 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 HOOK3Q86VS8 718 aa17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 SPDYE1Q8NFV5 336 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-209ENST00000536717 HEXDCQ8WVB3 486 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms