RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 FAM209AQ5JX71 171 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 AGAP9Q5VTM2 703 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 REP15Q6BDI9 236 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 SYT13Q7L8C5 426 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 AQP12AQ8IXF9 295 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 TMEM151AQ8N4L1 468 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 OR2T34Q8NGX1 318 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 OR2T3Q8NH03 318 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 ADAMTS16Q8TE57 1224 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 CLEC4CQ8WTT0 213 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 KCTD4Q8WVF5 259 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 ATP6V1E2Q96A05 226 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 MFSD3Q96ES6 412 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 PGAP3Q96FM1 320 aaPredicted RBP11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 TEKT5Q96M29 485 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 NPAS2Q99743 824 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 HOPXQ9BPY8 73 aaPredicted RBP11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 PSD2Q9BQI7 771 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 SMOC1Q9H4F8 434 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 CCSER2Q9H7U1 834 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 CAAP1Q9H8G2 361 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 TRNAU1APQ9NX07 287 aaKnown RBP11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 XPR1Q9UBH6 696 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 INVSQ9Y283 1065 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
CHRNB1-202ENST00000536404 FAM95CA0A1B0GW59 222 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 E2F8A0AVK6 867 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 ANKRD34BA5PLL1 514 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 KCNK1O00180 336 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 SLC9A3R1O14745 358 aaPredicted RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 MRASO14807 208 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 SLC22A1O15245 554 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 AQP9O43315 295 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 HTRA2O43464 458 aaPredicted RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 EPN2O95208 641 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 APBB3O95704 486 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 S100A5P33763 92 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 HTR7P34969 479 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 ENTPD1P49961 510 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 GEMP55040 296 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 DLG2Q15700 870 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 HECTD3Q5T447 861 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 C12orf40Q86WS4 652 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 ZNF354CQ86Y25 554 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 MMAAQ8IVH4 418 aaKnown RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 ATP6V0D2Q8N8Y2 350 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 PDZD8Q8NEN9 1154 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 SLC2A14Q8TDB8 520 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 OVCA2Q8WZ82 227 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 LPGAT1Q92604 370 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 ACDQ96AP0 544 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 PPWD1Q96BP3 646 aaKnown RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 SMARCD1Q96GM5 515 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 CNDP2Q96KP4 475 aaKnown RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 C9orf16Q9BUW7 83 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 TRIM62Q9BVG3 475 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 TDRD1Q9BXT4 1180 aaKnown RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 DUSP15Q9H1R2 295 aaPredicted RBP11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 TMEM181Q9P2C4 612 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 CD300AQ9UGN4 299 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 NDUFAF1Q9Y375 327 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 RNF11Q9Y3C5 154 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 SNX13Q9Y5W8 968 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 KIAA1549LQ6ZVL6 1849 aa11.47□□□□□ -0.57
CHRNB1-202ENST00000536404 KCNU1A8MYU2 1149 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 SLC30A4O14863 429 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 RGS13O14921 159 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 CACNG3O60359 315 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 NRP2O60462 931 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 SBK3P0C264 359 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 ZDHHC11BP0C7U3 371 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 NFKB1P19838 968 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 PCSK6P29122 969 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 SLC26A3P40879 764 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 DPP6P42658 865 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 DGKEP52429 567 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 MAP3K7CLP57077 242 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 FOXM1Q08050 763 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 SEMA3BQ13214 749 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 PLK5Q496M5 336 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 AGKQ53H12 422 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 LY6G5CQ5SRR4 150 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 CERCAMQ5T4B2 595 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 ABCA7Q8IZY2 2146 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 ESX1Q8N693 406 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 KIAA1958Q8N8K9 716 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 SUN5Q8TC36 379 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 PNPT1Q8TCS8 783 aaKnown RBP11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 NETO1Q8TDF5 533 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 LOXL4Q96JB6 756 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 ZC3H10Q96K80 434 aaKnown RBP11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 MLPHQ9BV36 600 aaPredicted RBP11.46□□□□□ -0.57
CHRNB1-202ENST00000536404 CEP41Q9BYV8 373 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms