RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DPCDQ9BVM2 203 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 GATA5Q9BWX5 397 aaPredicted RBP3.68□□□□□ -1.82
MCF2-210ENST00000536274 ASPSCR1Q9BZE9 553 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 ADAMTS10Q9H324 1103 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 OSGEPL1Q9H4B0 414 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 RSAD1Q9HA92 442 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TRPS1Q9UHF7 1281 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 EDARQ9UNE0 448 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 TMEM5Q9Y2B1 443 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PRKAB1Q9Y478 270 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PCDHGB6Q9Y5F9 930 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 GMPPBQ9Y5P6 360 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 PTGDR2Q9Y5Y4 395 aa3.68□□□□□ -1.82
MCF2-210ENST00000536274 SIPA1L1O43166 1804 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 hCG_1818297A0A087WSY0 165 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 OR2W5A6NFC9 320 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 C2orf81A6NN90 581 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NT5C1B-RDH14C9J2C7 533 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PPP6CO00743 305 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NME4O00746 187 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TREHO43280 583 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TADA2AO75478 443 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ATG12O94817 140 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NDUFB10O96000 172 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 BMP2P12643 396 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CBR1P16152 277 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PCSK2P16519 638 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF37AP17032 561 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 YWHAQP27348 245 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CASP2P42575 452 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 GLUD2P49448 558 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TPMTP51580 245 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CASP6P55212 293 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CYP4F2P78329 520 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ADARB1P78563 741 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 GHRHRQ02643 423 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 RAD51Q06609 339 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CYP4F3Q08477 520 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF460Q14592 562 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ARL13AQ5H913 290 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 SPOUT1Q5T280 376 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 CACHD1Q5VU97 1274 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 VN1R5Q7Z5H4 357 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 KRT73Q86Y46 540 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PM20D2Q8IYS1 436 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CLEC4FQ8N1N0 589 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MFSD2AQ8NA29 543 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ARRDC4Q8NCT1 418 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CHDHQ8NE62 594 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 RP9Q8TA86 221 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 CEP76Q8TAP6 659 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MCOLN3Q8TDD5 553 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ADAMTS14Q8WXS8 1223 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 COQ8BQ96D53 544 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PABPC5Q96DU9 382 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 MFSD3Q96ES6 412 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 B3GALT6Q96L58 329 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 RIPOR3Q96MK2 946 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 RNF145Q96MT1 663 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TMEM74Q96NL1 305 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NODALQ96S42 347 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TGIF2Q9GZN2 237 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 DEFB129Q9H1M3 183 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PCDH9Q9HC56 1237 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZBTB26Q9HCK0 441 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 AGPAT4Q9NRZ5 378 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 AGPAT3Q9NRZ7 376 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CACNA2D2Q9NY47 1150 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 DTLQ9NZJ0 730 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF639Q9UID6 485 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CLCA3PQ9Y6N3 262 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 HSPE1-MOB4S4R3N1 261 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZSWIM8A7E2V4 1837 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MYO18AQ92614 2054 aaKnown RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 WDR27A2RRH5 827 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TMEM150BA6NC51 233 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 EFCAB9A8MZ26 197 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 F8W810 466 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 RNF103O00237 685 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TRIM24O15164 1050 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MITFO75030 526 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 RASAL1O95294 804 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 OLFM2O95897 454 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 PTTG1O95997 202 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 EGFRP00533 1210 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CFDP00746 253 aaPredicted RBP3.67□□□□□ -1.82
MCF2-210ENST00000536274 IFNA16P05015 189 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 SPATA31C1P0DKV0 1188 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ERVK-10P10266 1014 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 JUPP14923 745 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CD36P16671 472 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ERCC2P18074 760 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FASP25445 335 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MAGEA11P43364 429 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 NAGLUP54802 743 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 TRAF3Q13114 568 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 MAMLD1Q13495 774 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 CDH18Q13634 790 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 FGFBP1Q14512 234 aa3.67□□□□□ -1.82
MCF2-210ENST00000536274 ZNF273Q14593 569 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms