RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ACSL5Q9ULC5 683 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 COL27A1Q8IZC6 1860 aaPredicted RBP13.27□□□□□ -0.28
RPAIN-205ENST00000536255 UBA6A0AVT1 1052 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 ESYT3A0FGR9 886 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 A6NCN8 305 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 H3BMM5 538 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 SGTAO43765 313 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 OR1I1O60431 355 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 ADARP55265 1226 aaKnown RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 PLOD1Q02809 727 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 FRG1Q14331 258 aaKnown RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 SEMA3AQ14563 771 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 AGAP9Q5VTM2 703 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 STEAP4Q687X5 459 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 IYDQ6PHW0 289 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 UNC5AQ6ZN44 842 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 LDB1Q86U70 411 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 SLC9B2Q86UD5 537 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 IGDCC3Q8IVU1 814 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 PALM2Q8IXS6 379 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 GSDMBQ8TAX9 411 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 SLC37A2Q8TED4 501 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 ATXN7L3BQ96GX2 97 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 PANX3Q96QZ0 392 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 SAYSD1Q9NPB0 183 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 PPANQ9NQ55 473 aaKnown RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.29
RPAIN-205ENST00000536255 ENTPD2Q9Y5L3 495 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 RP1P56715 2156 aa13.27□□□□□ -0.29
RPAIN-205ENST00000536255 TRBV23OR9-2A0A075B6M9 112 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 PRR19A6NJB7 356 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 TAF4O00268 1085 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 LIN7AO14910 233 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-205ENST00000536255 PPM1DO15297 605 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 BRINP1O60477 761 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 ESR1P03372 595 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 MPOP05164 745 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 ALDH4A1P30038 563 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 GPR3P46089 330 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 FASLGP48023 281 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 OR1D5P58170 312 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 RPA4Q13156 261 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 CUL1Q13616 776 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 NFE2L1Q14494 772 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 SEPT7Q16181 437 aaKnown RBP13.26□□□□□ -0.29
RPAIN-205ENST00000536255 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 METRNLQ641Q3 311 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 PTRHD1Q6GMV3 140 aaKnown RBP13.26□□□□□ -0.29
RPAIN-205ENST00000536255 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 ZDHHC24Q6UX98 284 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 B3GNT8Q7Z7M8 397 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 CCDC25Q86WR0 208 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 ANKMY2Q8IV38 441 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 IFT20Q8IY31 132 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 CFAP206Q8IYR0 622 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 SH3KBP1Q96B97 665 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 CERS2Q96G23 380 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 ARHGEF17Q96PE2 2063 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-205ENST00000536255 CCDC68Q9H2F9 335 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 POLR1BQ9H9Y6 1135 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 IL1RAPL1Q9NZN1 696 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 PRSS21Q9Y6M0 314 aa13.26□□□□□ -0.29
RPAIN-205ENST00000536255 KMT2BQ9UMN6 2715 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 SRRM3A6NNA2 597 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 BHMG1C9JSJ3 638 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 KPNA5O15131 536 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 B4GAT1O43505 415 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 GSTA2P09210 222 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 SLC35G4P0C7Q5 338 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 ERVK-10P10266 1014 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 XRCC1P18887 633 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 RPL10P27635 214 aaKnown RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 SLC1A2P43004 574 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 LSSP48449 732 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 INHBCP55103 352 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 EIF3BP55884 814 aaKnown RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 TUBB4BP68371 445 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 GABREP78334 506 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 HHEXQ03014 270 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 FASTKD3Q14CZ7 662 aaKnown RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 TRADDQ15628 312 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 AMZ1Q400G9 498 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 SYTL3Q4VX76 610 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 KIAA0408Q6ZU52 694 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 CNTN4Q8IWV2 1026 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 RBM12BQ8IXT5 1001 aaKnown RBP13.25□□□□□ -0.29
RPAIN-205ENST00000536255 NAT14Q8WUY8 206 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 IFT81Q8WYA0 676 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 ELMO1Q92556 727 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 LPGAT1Q92604 370 aa13.25□□□□□ -0.29
RPAIN-205ENST00000536255 TMEM159Q96B96 161 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms