RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ADGRE3Q9BY15 652 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 CRISPLD1Q9H336 500 aa17.7■□□□□ 0.42
RAB40C-203ENST00000535977 ZFP37Q9Y6Q3 630 aaPredicted RBP17.7■□□□□ 0.42
RAB40C-203ENST00000535977 UBA6A0AVT1 1052 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 VNN2O95498 520 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 MLYCDO95822 493 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 ALDOCP09972 364 aaKnown RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 MBL2P11226 248 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SELPP16109 830 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 CR2P20023 1033 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SLC11A1P49279 550 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 TTPAP49638 278 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 PTPRCAPQ14761 206 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 RPS6KA2Q15349 733 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 LRIT3Q3SXY7 679 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 UGT3A1Q6NUS8 523 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SDR16C5Q8N3Y7 309 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 PNPLA1Q8N8W4 532 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 BHMTQ93088 406 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SPON2Q9BUD6 331 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 TMEM45AQ9NWC5 275 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 GMPR2Q9P2T1 348 aaKnown RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 LRFN2Q9ULH4 789 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 OAS3Q9Y6K5 1087 aaKnown RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 ATP6AP2A0A1C7CYW4 349 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SUPT3HB4E1H0 165 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 PIP5K1BO14986 540 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 ATP6AP2O75787 350 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 UGT2B4P06133 528 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 TSPAN8P19075 237 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 EEF1B2P24534 225 aaKnown RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 HOXD10P28358 340 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SLC6A4P31645 630 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 BNIP2Q12982 314 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 ZNF177Q13360 481 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 MAPK11Q15759 364 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 GTF2IRD2BQ6EKJ0 949 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SIGIRRQ6IA17 410 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 PAQR3Q6TCH7 311 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 GTF2IRD2Q86UP8 949 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 TTC30BQ8N4P2 665 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 OR7D4Q8NG98 312 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 OR4K2Q8NGD2 314 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 GIPC2Q8TF65 315 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SEZ6LQ9BYH1 1024 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 SDR39U1Q9NRG7 319 aaPredicted RBP17.69■□□□□ 0.42
RAB40C-203ENST00000535977 ANKRD36A6QL64 1941 aa17.69■□□□□ 0.42
RAB40C-203ENST00000535977 H3BMM5 538 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 H3BNC9 293 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 KLK8O60259 260 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 VPS26AO75436 327 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 GJB3O75712 270 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 FMO4P31512 558 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 CLCN4P51793 760 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 CCDC58Q4VC31 144 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 WDR45BQ5MNZ6 344 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 ZNF773Q6PK81 442 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 DDIASQ8IXT1 998 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 SH3RF2Q8TEC5 729 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 CAPNS2Q96L46 248 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 CD320Q9NPF0 282 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 ARMC1Q9NVT9 282 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 PKD2L2Q9NZM6 624 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 ABCD2Q9UBJ2 740 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 AURKCQ9UQB9 309 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 THSD7BQ9C0I4 1608 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 LOC105371267A0A1B0GV96 52 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 TYW5A2RUC4 315 aaKnown RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 AQP12BA6NM10 295 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 ANGPT2O15123 496 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 SYNCRIPO60506 623 aaKnown RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 TPST1O60507 370 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 CRCPO75575 148 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 SIX3O95343 332 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 RPS17P08708 135 aaKnown RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 PIRTP0C851 137 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 JUNBP17275 347 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 HECTD3Q5T447 861 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 RSPO2Q6UXX9 243 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 PHYKPLQ8IUZ5 450 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 AQP12AQ8IXF9 295 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 SNX31Q8N9S9 440 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 OR2T34Q8NGX1 318 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 OR2T3Q8NH03 318 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 TUBGCP3Q96CW5 907 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 C17orf80Q9BSJ5 609 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 MUC13Q9H3R2 512 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 CWH43Q9H720 699 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 FBRSL1Q9HCM7 1045 aaKnown RBP17.68■□□□□ 0.42
RAB40C-203ENST00000535977 RNF186Q9NXI6 227 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 ZNF229Q9UJW7 825 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 BRCA2P51587 3418 aa17.68■□□□□ 0.42
RAB40C-203ENST00000535977 BCAS1O75363 584 aaPredicted RBP17.67■□□□□ 0.42
RAB40C-203ENST00000535977 RHOCP08134 193 aa17.67■□□□□ 0.42
RAB40C-203ENST00000535977 HSD17B1P14061 328 aa17.67■□□□□ 0.42
RAB40C-203ENST00000535977 HDCP19113 662 aa17.67■□□□□ 0.42
RAB40C-203ENST00000535977 SLC7A2P52569 658 aa17.67■□□□□ 0.42
RAB40C-203ENST00000535977 XAF1Q6GPH4 301 aa17.67■□□□□ 0.42
RAB40C-203ENST00000535977 B3GALT6Q96L58 329 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms