RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 DUSP28Q4G0W2 176 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 SLC24A5Q71RS6 500 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 ENDOVQ8N8Q3 282 aaKnown RBP9.41□□□□□ -0.9
TNC-210ENST00000535648 OR4C6Q8NH72 309 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 ALG3Q92685 438 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 HTRA1Q92743 480 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 GPR20Q99678 358 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 SPATA9Q9BWV2 254 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 HSD3B7Q9H2F3 369 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 TLE6Q9H808 572 aa9.41□□□□□ -0.9
TNC-210ENST00000535648 KAT6AQ92794 2004 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 ZNF432O94892 652 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 PGRP06401 933 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 SLC35G6P0C7Q6 338 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 NELFEP18615 380 aaKnown RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 HEPACAMQ14CZ8 416 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 FAM129CQ86XR2 697 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
TNC-210ENST00000535648 FRMD6Q96NE9 622 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 EVLQ9UI08 416 aaPredicted RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 REM1O75628 298 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 RPS9P46781 194 aaKnown RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 MASP1P48740 699 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 PITPNAQ00169 270 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 EIPR1Q53HC9 387 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 GPALPP1Q8IXQ4 340 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 GPR65Q8IYL9 337 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 RBM15BQ8NDT2 890 aaKnown RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 ZNF347Q96SE7 839 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 KCNS3Q9BQ31 491 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 NMUR2Q9GZQ4 415 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 MAGEH1Q9H213 219 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 CHRAC1Q9NRG0 131 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 OSER1Q9NX31 292 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 SYN3O14994 580 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 CCNKO75909 580 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 HSPA7P48741 367 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 SMU1Q2TAY7 513 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 LDLRAP1Q5SW96 308 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TREML2Q5T2D2 321 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 CLEC6AQ6EIG7 209 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TDRPQ86YL5 185 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 CENPNQ96H22 339 aaPredicted RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 ZNF317Q96PQ6 595 aaPredicted RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 NMUR1Q9HB89 426 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TIMM22Q9Y584 194 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 DGKBQ9Y6T7 804 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 SPEF2Q9C093 1822 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 NPHS1O60500 1241 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 UBXN7O94888 489 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 STBD1O95210 358 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 POP4O95707 220 aaKnown RBP9.4□□□□□ -0.9
TNC-210ENST00000535648 GSTT2BP0CG30 244 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 SELPP16109 830 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 KHKP50053 298 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TUBA1BP68363 451 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 SCN1BQ07699 218 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 RIPPLY1Q0D2K3 151 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 E2F2Q14209 437 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TBC1D25Q3MII6 688 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 ZNF311Q5JNZ3 666 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 RGMBQ6NW40 437 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TUBA1AQ71U36 451 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 TPK1Q9H3S4 243 aa9.4□□□□□ -0.9
TNC-210ENST00000535648 OR1F1O43749 312 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 PRPS2P11908 318 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 GNA12Q03113 381 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 CHST4Q8NCG5 386 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 OR14C36Q8NHC7 312 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 AZIN2Q96A70 460 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 WRAP53Q9BUR4 548 aaKnown RBP9.4□□□□□ -0.91
TNC-210ENST00000535648 TAPBPLQ9BX59 468 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 TBC1D24Q9ULP9 559 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 A0A1B0GVM2 712 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 TCAF2A6NFQ2 919 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 KMOO15229 486 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 CYB5AP00167 134 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 GOT2P00505 430 aaKnown RBP9.4□□□□□ -0.91
TNC-210ENST00000535648 GALNTL5Q7Z4T8 443 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 LPGAT1Q92604 370 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 HMCESQ96FZ2 354 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 ABCB9Q9NP78 766 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 DUS2Q9NX74 493 aaKnown RBP9.4□□□□□ -0.91
TNC-210ENST00000535648 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.91
TNC-210ENST00000535648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.4□□□□□ -0.91
TNC-210ENST00000535648 SMIM28A0A1B0GU29 152 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 MAGEB17A8MXT2 336 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 NME6O75414 186 aaPredicted RBP9.39□□□□□ -0.91
TNC-210ENST00000535648 EPHX1P07099 455 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 PBX3P40426 434 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
TNC-210ENST00000535648 DSC2Q02487 901 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 NOGQ13253 232 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 QSOX2Q6ZRP7 698 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 CRYBG2Q8N1P7 616 aa9.39□□□□□ -0.91
TNC-210ENST00000535648 SUN5Q8TC36 379 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms