RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RYK	P34925	604 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PDX1	P52945	283 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UBAP2L	Q14157	1087 aa	Known RBP	15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	LDLRAD1	Q5T700	205 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	RNF19B	Q6ZMZ0	732 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	TOR4A	Q9NXH8	423 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	STON1	Q9Y6Q2	735 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ROBO1	Q9Y6N7	1651 aa		15.52	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PPEF2	O14830	753 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PRKCG	P05129	697 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CA9	Q16790	459 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	BTN2A1	Q7KYR7	527 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CXXC5	Q7LFL8	322 aa	Known RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ZCCHC7	Q8N3Z6	543 aa	Known RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	COX18	Q8N8Q8	333 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	DCAF4L2	Q8NA75	395 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ZNF516	Q92618	1163 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ADGRE2	Q9UHX3	823 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PIK3C2A	O00443	1686 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	SNAP91	O60641	907 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	RHO	P08100	348 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	GATM	P50440	423 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CLCNKA	P51800	687 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	SLC25A24	Q6NUK1	477 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	RANBP3L	Q86VV4	465 aa	Predicted RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	NIPA2	Q8N8Q9	360 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	MIEF2	Q96C03	454 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	KXD1	Q9BQD3	176 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	NUAK2	Q9H093	628 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PIGV	Q9NUD9	493 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	SUSD2	Q9UGT4	822 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ARL5A	Q9Y689	179 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	LDOC1	O95751	146 aa	Predicted RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	NR2F6	P10588	404 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	HSPB3	Q12988	150 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	RAPSN	Q13702	412 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	NRF1	Q16656	503 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	C22orf39	Q6P5X5	142 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	C11orf65	Q8NCR3	313 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ZBED6CL	Q96FA7	236 aa	Predicted RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	TEPSIN	Q96N21	525 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	EFCAB11	Q9BUY7	163 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CNOT6	Q9ULM6	557 aa	Known RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	HS3ST4	Q9Y661	456 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	MYL9	P24844	172 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	AQP1	P29972	269 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	MAMDC4	Q6UXC1	1216 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	FAM92B	Q6ZTR7	304 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ATCAY	Q86WG3	371 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	SLC17A7	Q9P2U7	560 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CAPN14	A8MX76	684 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	MMP20	O60882	483 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	DLD	P09622	509 aa	Known RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	DGCR6	Q14129	220 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ZIK1	Q3SY52	487 aa	Predicted RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	TTMP	Q5BVD1	217 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PNPT1	Q8TCS8	783 aa	Known RBP	15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CD248	Q9HCU0	757 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PCDHB3	Q9Y5E6	796 aa		15.51	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PSMG1	O95456	288 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	DRICH1	Q6PGQ1	229 aa	Predicted RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	SLC38A4	Q969I6	547 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	STRADB	Q9C0K7	418 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CRISPLD1	Q9H336	500 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	LCA5L	O95447	670 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CD247	P20963	164 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	FSTL4	Q6MZW2	842 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CMTM6	Q9NX76	183 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	MRPL39	Q9NYK5	338 aa	Known RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	EIF2B4	Q9UI10	523 aa	Known RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CCDC162P	A2VCL2	907 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	KMO	O15229	486 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	OR4F21	O95013	312 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	CASP9	P55211	416 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	JAG1	P78504	1218 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	SLC10A7	Q0GE19	358 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	NFATC2	Q13469	925 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	COL9A3	Q14050	684 aa	Predicted RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	MBOAT1	Q6ZNC8	495 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	TPRG1	Q6ZUI0	275 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	LRRN4CL	Q8ND94	238 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	ZNF540	Q8NDQ6	660 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	IPCEF1	Q8WWN9	437 aa	Predicted RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	AGAP2	Q99490	1192 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	LRCH1	Q9Y2L9	728 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	REXO2	Q9Y3B8	237 aa	Known RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	IFT172	Q9UG01	1749 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PDPK1	O15530	556 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A9	O60656	530 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A6	P19224	532 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A1	P22309	533 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A4	P22310	534 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A3	P35503	534 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	HADHB	P55084	474 aa	Known RBP	15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	PTCHD4	Q6ZW05	846 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	OSTM1	Q86WC4	334 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A7	Q9HAW7	530 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A10	Q9HAW8	530 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	UGT1A8	Q9HAW9	530 aa		15.5	■□□□□ 0.07
NCAPD3-213	ENST00000534532	NEUROD4	Q9HD90	331 aa		15.5	■□□□□ 0.07

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms