RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GPR33Q49SQ1 333 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
CAPN1-225ENST00000533704 TIPARPQ7Z3E1 657 aaKnown RBP10.2□□□□□ -0.78
CAPN1-225ENST00000533704 LINC00523Q86TU6 105 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 CCDC89Q8N998 374 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 HM13Q8TCT9 377 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 STYXQ8WUJ0 223 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 HEXDCQ8WVB3 486 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 CDKN2AIPNLQ96HQ2 116 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 ZPBPQ9BS86 351 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 HELZ2Q9BYK8 2649 aaKnown RBP10.2□□□□□ -0.78
CAPN1-225ENST00000533704 ULBP3Q9BZM4 244 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 ZNF768Q9H5H4 540 aaKnown RBP10.2□□□□□ -0.78
CAPN1-225ENST00000533704 HRASLS2Q9NWW9 162 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 SIDT1Q9NXL6 827 aaKnown RBP10.2□□□□□ -0.78
CAPN1-225ENST00000533704 SMARCAL1Q9NZC9 954 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 PILRAQ9UKJ1 303 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 KALRNO60229 2985 aa10.2□□□□□ -0.78
CAPN1-225ENST00000533704 TLN1Q9Y490 2541 aaKnown RBP10.2□□□□□ -0.78
CAPN1-225ENST00000533704 IGHV5-51A0A0C4DH38 117 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 UBA6A0AVT1 1052 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 KLHL33A6NCF5 533 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 OR6C74A6NCV1 312 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 OR5K3A6NET4 321 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 OR51F1A6NGY5 319 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 TOX3O15405 576 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 SGTAO43765 313 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 KIAA0754O94854 1291 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 CCDC175P0C221 793 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 FAM87AP0C7U9 286 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 PRKAR1AP10644 381 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 ZNF28P17035 718 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 MSNP26038 577 aaKnown RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 ACRV1P26436 265 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 MAP4P27816 1152 aaKnown RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 STIP1P31948 543 aaKnown RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 FDFT1P37268 417 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 PREPP48147 710 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 PRLHRP49683 370 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 CACNG1Q06432 222 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 CDH17Q12864 832 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 KCNAB1Q14722 419 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 OASLQ15646 514 aaKnown RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 DBN1Q16643 649 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 TBR1Q16650 682 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 LINC00303Q3SY05 128 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 ZNF449Q6P9G9 518 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 FBXO38Q6PIJ6 1188 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 PRSS42Q7Z5A4 293 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 ZNF605Q86T29 641 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 OOSP2Q86WS3 158 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 KLHDC8BQ8IXV7 354 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 CLDN19Q8N6F1 224 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 EXD3Q8N9H8 876 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 SIDT2Q8NBJ9 832 aaKnown RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 GALNT6Q8NCL4 622 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 STAMBPL1Q96FJ0 436 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 MED8Q96G25 268 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 FERD3LQ96RJ6 166 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 MAP3K3Q99759 626 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 CCM2Q9BSQ5 444 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 FRMD8P1Q9BZ68 369 aaPredicted RBP10.19□□□□□ -0.78
CAPN1-225ENST00000533704 COG4Q9H9E3 785 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 VPS37BQ9H9H4 285 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 ETNK1Q9HBU6 452 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 RAB6BQ9NRW1 208 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 SLC24A2Q9UI40 661 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 LNPEPQ9UIQ6 1025 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 COLEC10Q9Y6Z7 277 aa10.19□□□□□ -0.78
CAPN1-225ENST00000533704 TRBV5-4A0A0C4DH59 114 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 LOC101059948A0A1B0GTJ6 334 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 CCDC162PA2VCL2 907 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 GSAPA4D1B5 854 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 ERI2A8K979 691 aaKnown RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 ZNF891A8MT65 544 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 AGAP14A8MT82 685 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 IFRD1O00458 451 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 NKX2-8O15522 239 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 ITGB2P05107 769 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 APRTP07741 180 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 EBLN1P0CF75 366 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 ZSCAN5DPP0CG00 497 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 NELFEP18615 380 aaKnown RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 POLR2CP19387 275 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 GRIA1P42261 906 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 NFATC3Q12968 1075 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 PRKAA1Q13131 559 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 TUBB3Q13509 450 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 BRD3Q15059 726 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 SKIDA1Q1XH10 827 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 XKR5Q6UX68 686 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 C6orf15Q6UXA7 325 aaPredicted RBP10.18□□□□□ -0.78
CAPN1-225ENST00000533704 CERS6Q6ZMG9 384 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 GSTA5Q7RTV2 222 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 PIANPQ8IYJ0 282 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 ESX1Q8N693 406 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 GLIS1Q8NBF1 620 aa10.18□□□□□ -0.78
CAPN1-225ENST00000533704 PHC3Q8NDX5 983 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms