RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 KLHL35Q6PF15 583 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 LRRC69Q6ZNQ3 347 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 SYDE1Q6ZW31 735 aaPredicted RBP9.62□□□□□ -0.87
NUP98-220ENST00000533346 PRSS42Q7Z5A4 293 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 PCGF5Q86SE9 256 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 CAND1Q86VP6 1230 aaKnown RBP9.62□□□□□ -0.87
NUP98-220ENST00000533346 LRRC6Q86X45 466 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 DTX1Q86Y01 620 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 TRIM48Q8IWZ4 208 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 LMNTD2Q8IXW0 634 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 CFAP206Q8IYR0 622 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 TAB3Q8N5C8 712 aaPredicted RBP9.62□□□□□ -0.87
NUP98-220ENST00000533346 GPR150Q8NGU9 434 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 CXorf40BQ96DE9 158 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 C9orf72Q96LT7 481 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 CCDC74BQ96LY2 380 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 TEFMQ96QE5 360 aaKnown RBP9.62□□□□□ -0.87
NUP98-220ENST00000533346 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 TCF12Q99081 682 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 ZPBPQ9BS86 351 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 TBC1D10AQ9BXI6 508 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 AP1M1Q9BXS5 423 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 SPRY4Q9C004 299 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 FAM96AQ9H5X1 160 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 COG4Q9H9E3 785 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 XAB2Q9HCS7 855 aaKnown RBP9.62□□□□□ -0.87
NUP98-220ENST00000533346 PIH1D1Q9NWS0 290 aaKnown RBP9.62□□□□□ -0.87
NUP98-220ENST00000533346 SLC2A6Q9UGQ3 507 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 PYCARDQ9ULZ3 195 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 SAR1BQ9Y6B6 198 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 COLEC10Q9Y6Z7 277 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 CELSR3Q9NYQ7 3312 aa9.62□□□□□ -0.87
NUP98-220ENST00000533346 FAM237BA0A1B0GVD1 139 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 OR52A4PA6NMU1 304 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 CCDC188H7C350 402 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 ZNF185O15231 689 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 JMJD7P0C870 316 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 PRSS56P0CW18 603 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 FGF3P11487 239 aaPredicted RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 IVDP26440 423 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 ARNTP27540 789 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 ACADLP28330 430 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 SLC5A2P31639 672 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 CSTF2P33240 577 aaKnown RBP eCLIP9.61□□□□□ -0.87
NUP98-220ENST00000533346 PTGIRP43119 386 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 ARCN1P48444 511 aaKnown RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 TTPAP49638 278 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 UCNP55089 124 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 GNG11P61952 73 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 PRAMEP78395 509 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 MC2RQ01718 297 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 PTK6Q13882 451 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 TYSND1Q2T9J0 566 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 FASTKD1Q53R41 847 aaKnown RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 PHF19Q5T6S3 580 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 TMEM164Q5U3C3 297 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 KIAA0930Q6ICG6 404 aaPredicted RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 ZNF449Q6P9G9 518 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 DET1Q7L5Y6 550 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 TAS2R42Q7RTR8 314 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 HOOK3Q86VS8 718 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 BPHLQ86WA6 291 aaPredicted RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 KMT5CQ86Y97 462 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 CLDN19Q8N6F1 224 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 KLHL6Q8WZ60 621 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 RMDN2Q96LZ7 410 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 SERPINB12Q96P63 405 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 CD180Q99467 661 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 NAPGQ99747 312 aaPredicted RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 WWP1Q9H0M0 922 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 P2RY12Q9H244 342 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 ZNF768Q9H5H4 540 aaKnown RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 TFB2MQ9H5Q4 396 aaKnown RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 PRORYQ9H606 182 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 KIR3DX1Q9H7L2 352 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 MVB12BQ9H7P6 319 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 LATS2Q9NRM7 1088 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 SIDT1Q9NXL6 827 aaKnown RBP9.61□□□□□ -0.87
NUP98-220ENST00000533346 TMEM9Q9P0T7 183 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 SLC24A2Q9UI40 661 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 ANAPC5Q9UJX4 755 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 LHX6Q9UPM6 363 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 PRSS21Q9Y6M0 314 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 IGSF10Q6WRI0 2623 aa9.61□□□□□ -0.87
NUP98-220ENST00000533346 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 OR51F1A6NGY5 319 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SDR42E2A6NKP2 422 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 C9orf172C9J069 976 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 MATN2O00339 956 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 PRMT5O14744 637 aaPredicted RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 FANCGO15287 622 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 CD3EAPO15446 510 aaKnown RBP9.6□□□□□ -0.87
NUP98-220ENST00000533346 GPC4O75487 556 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 USP1O94782 785 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 TMEM63AO94886 807 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 SLC35G4P0C7Q5 338 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 LIPCP11150 499 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 AMD1P17707 334 aa9.6□□□□□ -0.87
NUP98-220ENST00000533346 OGNP20774 298 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms